Gossypium hirsutum (upland cotton): 107951328
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Entry
107951328 CDS
T04793
Name
(RefSeq) lysine--tRNA ligase, cytoplasmic isoform X2
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
107951328
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ghi01007
]
107951328
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ghi03016
]
107951328
Enzymes [BR:
ghi01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
107951328
Amino acid related enzymes [BR:
ghi01007
]
Aminoacyl-tRNA synthetase
Class II (A)
107951328
Transfer RNA biogenesis [BR:
ghi03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
107951328
Prokaryotic type
Other AARSs
107951328
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Spexin
Peptidase_S46
Motif
Other DBs
NCBI-GeneID:
107951328
NCBI-ProteinID:
XP_016741825
UniProt:
A0A1U8NSK5
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Position
A02:complement(25995719..26007676)
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AA seq
612 aa
AA seq
DB search
MEGSVEETAKGVSDLAVDSASPAEIQSKNARKKELKNKQREEERRRKEEEKAAKQAAAKA
SSHCQKSAGADDEDMDPTQFHENRLKFLAAQKAEGKNPYPHKFFASMSIIEYINKYGSLA
NGEHIEDVVVSLAGRIMSKRSSSSKLFFYDLHGDGAKVQVMADASKSGLDEAEFAKFHSG
VKRGDIVGVTGFPGKTKRGELSIFPKSFTVLSHCLHMMPRQKAGPDASVKKTDLWVPGST
RNPEAYILKDQETRYRQRYLDLMLNLEVRQIFKTRSKIISYVRSFLDNLDFLEVETPMMN
MIAGGAAARPFVTHHNELNMKLYMRIAPELYLKELVVGGLDRVYEIGKQFRNEGIDLTHN
PEFTTCEFYMAFADYNDLMELTEKMLSGMVKELTGGYKIKYHSNGLENDPIEIDFTPPFR
RLDMVEELEKMANLNIPKDFSSDEANKYLVDACAKFEIKCPPPQTTARLLDKLVGHFLEE
TCVNPTFIINHPEIMSPLAKWHRSKPGLTERFELFINKHELCNAYTELNDPVVQRQRFAE
QLKDRQSGDDEAMALDETFCTALEYGLPPTGGWGLGIDRLAMLLTDSQNIKEVLLFPAMK
PQDEPSAKAPGT
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggaaggctccgtcgaagaaacggccaagggagtttccgatttagcagtggattcggct
tcccccgcagaaattcagagcaaaaatgctcgtaagaaggaacttaaaaataagcagcgg
gaagaggagcgtcgccgcaaggaggaggaaaaagcagccaaacaggctgcagccaaggca
agctcacattgtcagaaatctgctggagctgatgatgaagatatggatcccacgcaattc
catgagaataggctgaaatttcttgcagcccagaaagcagaaggaaaaaatccatatcct
cataagttctttgcatcgatgtctattattgaatatataaataaatatggaagcttagcc
aatggggagcatattgaggatgtcgtagtatctttggctggtcgaattatgagcaaaaga
tcatcaagttcaaagcttttcttttatgacttgcacggtgatggtgccaaagtccaagtt
atggctgatgcaagcaagtcaggcttggatgaagcagaatttgcaaaattccattccggt
gtgaagcgtggtgatatagttggtgtcactgggtttccaggaaaaacaaagagaggggag
ttgagcatctttcccaagtcatttactgttttatcccattgtctccatatgatgccaagg
caaaaagcaggtcctgatgccagtgtgaagaaaactgatttatgggtcccaggaagtacc
aggaaccctgaagcatatattttgaaggatcaggaaacacgatatcgccaacggtatctt
gatttgatgttaaacctggaggttcgtcaaatattcaagaccagatctaagatcatttct
tatgtaaggagttttcttgacaatcttgatttcttggaggttgagactcccatgatgaac
atgattgctggaggtgcagctgcccgtccatttgtaacccatcacaatgaattaaacatg
aagctctacatgcgtattgcaccggagttatatcttaaggagcttgtagttggtggactg
gatcgtgtttatgaaattggaaaacagtttagaaatgagggtattgatttgactcacaat
cctgaattcactacttgcgagttctatatggcttttgcagactataatgacctgatggag
ctcactgaaaaaatgttgagtggaatggtcaaggaacttacaggtggctataagattaaa
tatcactcaaatggccttgaaaatgatccaatagagattgatttcactccgcctttcagg
aggcttgacatggtcgaggagttggagaagatggctaacctcaatatacccaaggacttt
tccagtgatgaagctaacaaatatttggtggatgcatgtgcaaagtttgagatcaaatgc
cctcctcctcaaacaacagcacgtttattagataaacttgttgggcattttctagaagag
acgtgtgtgaatcctactttcataatcaaccatcctgaaataatgagtcctttggctaag
tggcataggtcaaaaccaggactgactgaacgttttgaactttttatcaacaaacatgaa
ctctgcaatgcatacactgagttgaatgatcctgttgtacaacgtcaacgattcgctgaa
caactgaaggatcggcaatcgggtgatgatgaagcaatggctttggatgaaacattctgt
actgcacttgagtacggattgccaccaacaggtggttggggactgggcattgatcggcta
gctatgttattaacagattcacagaatatcaaggaggttcttctcttcccagccatgaaa
cctcaggatgaaccatcagccaaagctccaggaacataa
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