Gossypium hirsutum (upland cotton): 107951384
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Entry
107951384 CDS
T04793
Name
(RefSeq) methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial isoform X1
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00280
Valine, leucine and isoleucine degradation
ghi01100
Metabolic pathways
Module
ghi_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
107951384
Enzymes [BR:
ghi01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
107951384
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Gene cluster
GFIT
Motif
Pfam:
MCCA_BT
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
Biotin_lipoyl_2
NQRA_N
HlyD_3
HlyD_D23
ATPgrasp_ST
RnfC_N
Motif
Other DBs
NCBI-GeneID:
107951384
NCBI-ProteinID:
XP_016741920
UniProt:
A0A1U8NSV5
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Position
A08:11729360..11736050
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AA seq
741 aa
AA seq
DB search
MMSLLSSILRRKPAVLLQVRLLSSYGPPPGTTSQQKRIEKILVGNRGEIACRIVRTAKRL
GIRTVAVYSDADKDSLHVKSADEAVHIGPPPARLSYLNGSSIVEAAVRTGAQAIHPGYGF
LSESSEFAQLVEDRGLTFIGPPASAIRDMGDKSASKRIMGAAGVPLVPGYHGSEQDVEIM
RLEADKIGYPILIKPTHGGGGKGMRIVQGPNEFVDSFLGAQREAAASFGINTILLEKYIT
QPRHIEVQIFGDKFGNVLHLYERDCSVQRRHQKIIEEAPAPCVTHEFRTHLGQAAVSAAK
AVGYHNAGTVEFIVDTKTGHFYFMEMNTRLQVEHPVTEMIVGQDLVEWQIRVANGEPLPI
SQDQVPLSGHAFEARIYAENVPKGFLPATGVLHHYHPVQPSSTVRVETGVEQGDVVSMHY
DPMIAKLVVWGENRAAALVKLKDCLLKFQVAGLPTNINFLQKLANHKAFEEGNVETHFIE
HHNDDLFVDPNNKVIYEDAYSAARLGAKLVAACLCEKERSAMKESHSGDPSLLPIWYAHP
PFRVNHHAQRTMEFEWENEYESSSSKPLMLSITYHPDGNYFIQHQQIGENGVHILEVKAS
NLGNDNFIVESDGLTMNVSLAVYTKGQIKHIHIWHGPHHHHFRLKLGLDLSDENETQHKT
SFETTSHPPGTVVAPMAGLVVKVLVEDGAKVEAGQPVLVLEAMKMEHVVKATSGGVVEGL
KVGAGQQVSDGSVLFRIKAQE
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcgttattgtcgtcaattctccgtcgaaagcccgccgtgcttctccaagtacgg
ctactatcttcgtatggtcctcctcccggaacgacgtcgcagcagaaacgcattgagaaa
atcctggtgggcaaccgaggcgagatagcatgcaggatcgtgaggacagctaagcgtcta
gggattcggacggtagccgtttacagcgatgccgataaagactctctccatgtgaaatcg
gccgacgaggcggttcacatcggtccacctcctgctcggctcagttacttgaacggttct
tccattgtcgaggcggcggttcggaccggtgcacaggccatccaccccggttatggtttc
ttatcggagagctctgagtttgctcaacttgttgaagatagggggcttacatttattggt
cctccagcgtctgcaattagagacatgggtgacaaaagtgcttcgaagagaataatgggt
gcggcaggggtgccattggtgccgggatatcatggcagcgagcaagatgttgagattatg
aggttggaggcagataaaattggatatcctatcttaataaagccaacccatggaggcgga
ggaaagggtatgagaattgtacaaggtccgaatgaatttgttgactcctttcttggagca
caacgcgaagctgctgcatcttttggcataaacactattttgttggagaaatacattact
caaccaagacacatagaagttcagatatttggtgacaaatttggcaatgtactgcattta
tatgagagagattgcagcgttcaaaggagacaccagaagataattgaagaagctccagct
ccttgtgttactcatgaatttcgcacacacttgggccaggctgccgtatctgctgctaag
gcagttggttatcacaatgctggcactgtggagtttatagttgataccaaaacaggtcat
ttttacttcatggagatgaacactcgacttcaggttgagcatcctgtgactgagatgatt
gttggtcaagatctcgtggagtggcaaattcgtgttgcaaatggggagcctcttcctata
agtcaggatcaggtgcccttatcaggtcatgcttttgaagcccgaatctatgctgaaaat
gttcccaaaggatttcttcctgcaactggagttcttcatcattatcatccagtacaaccc
tcttcaacagttcgggttgagactggagttgaacaaggagatgttgttagcatgcattat
gatcctatgattgcaaagcttgtagtatggggagaaaaccgtgctgcagcactagtcaaa
ttgaaggattgcttgttaaagtttcaggttgcagggttgccaactaatatcaatttccta
caaaagcttgctaaccataaggcatttgaagagggcaatgttgaaacgcattttattgag
caccataacgatgacctatttgttgatcctaataataaagtaatttatgaggatgcatat
agtgcagctagacttggagcaaagctggtagctgcttgcctttgtgaaaaggaacgttct
gctatgaaagaaagccattctggggatcctagcttacttcctatatggtatgctcatcct
ccattcagagtcaatcatcatgcacagaggaccatggaatttgagtgggaaaatgaatat
gagagcagtagttcaaagcctttgatgctttctatcacttatcatcctgatgggaactat
tttattcagcatcaacagattggagaaaatggtgtccacatattggaagtcaaagcatca
aatctgggcaatgataattttatagttgagtctgatggtttaaccatgaatgttagttta
gctgtttataccaagggtcagatcaaacacatacatatatggcatgggccgcaccaccat
catttcagactgaaactaggccttgacctgtctgatgaaaatgaaacacagcataagacg
agtttcgagaccacaagccaccctcctgggactgtagtggcacccatggctggtttagtg
gtcaaggttctggtagaggatggggcgaaggtggaagcaggacaacctgtattggtcctt
gaagccatgaagatggagcatgtggtaaaagcaacatctggtggtgttgttgaagggctt
aaagtcggtgctggtcagcaggtttcagatggtagtgttctcttcagaatcaaggcccag
gaatga
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