Gossypium hirsutum (upland cotton): 107951413
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Entry
107951413 CDS
T04793
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 16
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ghi01002
]
107951413
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107951413
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
107951413
Peptidases and inhibitors [BR:
ghi01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
107951413
Ubiquitin system [BR:
ghi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
107951413
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
Motif
Other DBs
NCBI-GeneID:
107951413
NCBI-ProteinID:
XP_040939381
UniProt:
A0ABM2Z9J6
LinkDB
All DBs
Position
A02:18419707..18427448
Genome browser
AA seq
1072 aa
AA seq
DB search
MLFIWDLGFPSLVLVLSLLLPLIGFFVRRKWQFSVARQAEIKRLLILASEEAARVELEAT
IEYGTVSISRNYHQCAVCYCPTTTRCARCKGVRYCSAKCQIIHWRQGHKEECHPPAIAIH
QNHDEGSDYGQKAINQDQYGDRYEIEEKSHAKLIGTSSTESALFSSITGPALLSSSSSSV
VLDGKDDDAKVEFHADREGLSSAPESSSASFSGFSSAAGSESSDDVSVCESVSSNELDKL
DGSSSADVNLDTFWTSVVNNVDQTNPSSPKFVSLVDSVDEISKLSHSKPDQSEESQCRAT
SSSGLGVSDMSEGSNAEASRFSSDFWGRTLESVPSTSVDDNESFNSYHKEGSKMASLDSG
SSLHFSFTLAGNASSSYPQVSKVKDAKLDDATQCATTLGHSKLSDGVVLSENGGLDSPNE
GNSKSSNSVCTNQGECGSNNIQHVINPREAINIDFPLVGSLSSSHFEKSGSTVVTNGPSI
SNASHLSESSDSYSSSDRVHAVPSVKSGKFDDVHANFAKLSQFSSYSSNGKNGLKTSMWK
VVDQFRVSKFPNTIHLELVMRLGIFPYESFVKLYSWNKVELQPRGLVNCGNSCYANAVLQ
CLTFTPPLTAYFLHGIHSKACAKKDWCFTCEFEKIILKAKDGKSPLSPIGILSQLQNIGS
QLANGKEEDAHEFLRYAIDAMQSICLKEAGLASSGCLEEETTLIGLTFGGYLRSKIKCMK
CQGKSERHEKMMDLTVEIEGDIGTLEEALRRFTRTEILDGENKYQCSRCKSYEKAKKKLT
ILEAPNILTIALKRFQSGKFGKLNKAIRFPEILDLAPYMSGTSDKSPIYRLYGVVVHLDI
MNAAFSGHYLCYVKNAQNKWFKIDDSMVTSTELERVLTKGAYMLLYARCSPRAPRLMKSR
NKAIPSSVNSKNPLKSNSWTYSGLDEFHPSLIHSDTPSSIESFYSKYNQLQRILEDSSSS
DSCSLFSVNSDEGSCCTDSTRDSTSTDDLIDSIFGDSVQGWNSPWRSCDSDASFSSSSSP
LYLRHSPVADLDRYSSGSPEIRSSRMDEEGKGDDPFFHSDTMSKQCRKVVVA
NT seq
3219 nt
NT seq
+upstream
nt +downstream
nt
atgctttttatttgggatttagggtttccgagcctggtgctcgtgctctccctcctcctt
cctttgatcggctttttcgtaaggcggaaatggcagttttctgtagcaaggcaagcggag
ataaagaggctcttgattttggcctctgaggaggcggctagagtcgagcttgaagcgact
attgaatacggtacggtttctatttcgcggaactatcaccagtgtgctgtttgttattgt
cctactaccacgcggtgcgctcgctgtaaaggggttcgatattgttctgcgaagtgtcaa
attattcactggcggcaaggtcacaaggaagaatgccacccacctgccattgccatacac
caaaatcatgatgaagggagcgattatggtcagaaggcgataaatcaagaccaatatgga
gatagatatgagattgaagaaaagtcacatgcaaagttaattggaacatcctctactgaa
tctgcattgtttagttccatcacaggacctgcattattgagttcctctagctcttctgtg
gttttagatgggaaggatgatgatgcaaaggttgagtttcatgctgatagggaaggactg
agctctgctccagaatcttccagtgcttcattttcaggattttcgtctgcagctggtagt
gaatcatctgatgatgtttctgtgtgtgagagcgtaagttcaaatgagcttgataaattg
gatggttcctcatctgctgatgttaatcttgacacgttttggacttctgttgtcaacaat
gtggatcaaaccaatccatcatcccctaaatttgtcagtttggttgattctgtagatgaa
atttctaaattaagtcatagcaagcctgatcaaagtgaagagagccagtgcagagcaact
agttcttcaggattaggtgttagtgatatgtctgagggctcaaatgctgaggcttctaga
ttttcttctgatttttggggcagaactttggaatcagttccatctacaagtgttgatgac
aatgagtcatttaactcttatcataaagaaggcagtaaaatggcctcacttgattctgga
tcatccttacatttttcatttactttggctggaaatgcttcttcctcatatccgcaagtc
tccaaggtgaaagatgccaaattggatgatgctactcaatgtgctactactttggggcat
tccaagctttcagatggagtagttttgtccgaaaatggtggtttagattctccgaatgaa
ggaaactccaagtcctcaaattctgtatgcaccaaccagggtgaatgtggatctaacaat
attcagcatgttataaatcccagagaagctatcaatatagattttccgctagtcggtagc
ttgtcatcttcccattttgaaaaatcaggctctactgttgtcactaatggacctagcatt
agcaatgcttctcatttgtcagagtcatctgattcttattcatccagtgacagagtgcat
gctgttcccagtgtgaaatctggaaaatttgatgatgttcatgcaaatttcgctaaatta
tctcagttttcaagttattcttctaacggtaagaatggattgaaaacctcaatgtggaaa
gttgttgatcaattcagagtatctaaatttccaaacaccattcatttggagttagtaatg
aggttgggaatttttccttatgaatcatttgtcaagctttatagttggaacaaggtggaa
ttacaaccacgtggccttgtaaattgtggtaacagctgttatgccaatgctgtccttcaa
tgcttgactttcactcctcctctgactgcttactttcttcatggaatccattccaaagca
tgtgcaaagaaagattggtgtttcacttgtgagttcgaaaaaataattttgaaggctaaa
gatgggaaatctccgctgtcccctataggaatactttcccaactacaaaatattggcagt
caacttgctaatgggaaagaggaagatgcacatgaatttttaaggtatgctattgatgct
atgcaatctatttgtcttaaagaagctgggttggcttcatcaggttgtttagaagaagaa
acaactttaataggcttaacatttggaggctaccttcggtcaaagataaagtgcatgaag
tgccaaggcaagtccgaacgtcatgaaaaaatgatggacctaacagttgaaattgaagga
gacataggaaccctagaagaggctcttcggcggtttactaggactgaaattctggatgga
gaaaacaagtaccaatgtagcagatgcaaatcttatgagaaggccaaaaagaagttgaca
atattagaggctccaaatattcttacaattgctttgaagagatttcagtctggtaaattt
ggaaagcttaacaaagcgattcggttccctgagattttggacttggcaccatatatgagt
gggacaagtgataaatcacccatatacaggctctatggagtagtggtccatttggatatc
atgaatgcagcattttcgggtcactacttgtgctatgttaaaaatgctcaaaacaagtgg
tttaagattgatgacagcatggtaacatctacagaactcgaaagagttctaacaaaagga
gcatatatgcttctttatgccaggtgctcacctcgggccccgagattgatgaagagcaga
aataaagccattccatcgagtgtcaattcaaagaatccgctgaagtcaaattcttggaca
tattctggtcttgatgaattccaccccagcttgattcattcagatactcctagcagtatt
gaatctttttattcaaaatacaatcagctgcaaaggattttagaggactcgtcgtcaagt
gatagttgttctctttttagcgtcaattctgatgaaggttcctgctgtactgatagcaca
cgtgattctaccagcactgatgacttaatagattctatatttggtgattcagtccaaggg
tggaacagcccatggaggagttgtgattcagatgcttctttttcatcatcttcttccccc
ctttacttgaggcattcacctgttgctgatttagaccgatatagttcgggttcacccgaa
attcgcagctctcgaatggatgaggaaggtaagggagatgatccttttttccactccgac
acgatgagtaaacaatgtagaaaggtagtagtagcttag
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