KEGG   Gossypium hirsutum (upland cotton): 107951467
Entry
107951467         CDS       T04793                                 
Name
(RefSeq) F-box protein SKP2B
  KO
K03875  F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    107951467
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ghi04121]
    107951467
Ubiquitin system [BR:ghi04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     107951467
SSDB
Motif
Pfam: LRR_6 LRR_4 F-box-like F-box LRR_At5g56370 LRR_Zer-1 LRR_At1g61320_AtMIF1 F-box_4 RsmF_methylt_CI
Other DBs
NCBI-GeneID: 107951467
NCBI-ProteinID: XP_016742019
UniProt: A0A1U8NVK7
LinkDB
Position
A02:complement(12379067..12382216)
AA seq 372 aa
MIGEAKVGNEDLNLCFEKLMMVAAGNSEGVKMNSVGITEWKDIPVELLLRIVSLLDDQTA
IVASSVCSGWRDAICLGLTQLCLSWCRKNMNNLVLSLAPKFTRLQTLILRQENPQLEDNA
VESISKFCHDLQDLDLSKSFKLSDRSLYALARGCPNLKKLNISGCTSFSDEALAYLTNFC
RKLKILNLCGCVKAATDHALQAIGRNCNMLQSLNLGWCDNVGDLGVMSLAYGCHDLRCLD
LCGCVRITDDSVIALANECLHLRSLGLYYCRNITDRAMYSLAHSRVKNKGSMWESSMKGR
YEDDGLKSLNISQCTALTPSAVQALCDTFPALHTCSGRHSLVMSGCLNLTSVHCACAVQA
HRTFNTIFHTAH
NT seq 1119 nt   +upstreamnt  +downstreamnt
atgattggtgaagcaaaagttgggaatgaagacttgaacttatgctttgagaagctgatg
atggttgcagctgggaatagtgagggagttaagatgaatagcgtggggatcactgagtgg
aaagatatccctgtggagctgctgttgagaatcgtttcactactcgatgatcagaccgct
atcgttgcttccagtgtctgtagtgggtggagggatgccatttgcttgggcctcacacaa
ctctgtctctcatggtgtagaaagaacatgaacaatttggttctatctcttgcacctaaa
ttcaccagactgcaaactctgatattgcgccaagagaatccacagctcgaggacaatgct
gtcgagagtatttcaaagttttgtcacgatctgcaggacctggacctcagcaaaagtttc
aagcttagtgatcgctccttgtatgcattggctcgcggttgtcctaaccttaaaaagctt
aacatcagtggctgcacatcattcagcgatgaagctctcgcgtatttgactaatttttgt
cgaaaactaaaaatattaaatctgtgcggatgtgttaaagctgcaactgaccatgcactg
caggctattggacgaaactgcaatatgttgcaatctttgaatctgggatggtgtgacaat
gttggtgatctcggagtcatgagtttagcatacggatgccatgatctccgatgcctggac
ctgtgtggttgtgttcgtataacagatgatagcgtgattgctttagcaaacgagtgtctc
catttgaggtcgctcggactgtactattgccgtaacatcacagacagggcgatgtactca
ttggctcatagccgagtgaagaacaaaggttcgatgtgggagtcgtcgatgaaaggtaga
tatgaagatgatggtttaaaaagtctgaatataagccagtgtacggcactgactccatca
gcagttcaggctttatgtgacacattccctgcacttcatacctgctctggaaggcactcc
cttgttatgagtggttgcttgaacttaacctccgtgcactgtgcttgtgcggttcaagct
caccggaccttcaacactattttccatacagctcattga

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