Gossypium hirsutum (upland cotton): 107951606
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Entry
107951606 CDS
T04793
Name
(RefSeq) YTH domain-containing protein ECT4 isoform X1
KO
K20102
YTH domain-containing family protein
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107951606
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107951606
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
YTH
Motif
Other DBs
NCBI-GeneID:
107951606
NCBI-ProteinID:
XP_016742192
UniProt:
A0A1U8NT82
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Position
A02:complement(8867920..8871946)
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AA seq
654 aa
AA seq
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MYQEGAPEIVIDQGMYYPTATNYGYYCTGFESPVEWEDHQNIFSADGPDVQFAGAQTEPL
PYVYYTPSYGYAQSPYNPYNPYIPGAVMGDGPFVGAQQYYPFPPYQNPVSPTAYVPVLIQ
PDGIPSSSTDSFLDTHASIGTRPDGRGVRYNLASASAATSRKSAPNRADSMSRVTDGQSK
HYAIQESISASSGSASARAHQVRVASGSVQSIGNIPGGKLPPYRNQLKTDLPVGNTISDY
GASSPGRGVLDRLRPKIHVSRVFNDAHGSPDSWAEQNRGPRTNRSKNQLMVKAYTSKAGN
SDAEGNIIIYTDQYNKDDFPIDYVDAKFFVIKSYSEDDVHKSIKYNVWSSTPHGNRKLDS
AFEDAQKIAAGKPSGCPIFLFFSVNVSGQFCGVAEMIGPVDFQKDMDFWQQDKWSGSFPV
KWHIIKDVPNSHFRHIILGNNENKPVTNSRDTQEIMYKQGMEMLKVFKNHAMKTSLLDDF
MYYENRQRIMQEEKAMQLIKSIENPVLAPAFDPVNKLNHVELLLNEHERSTKQSDPERLR
TIVPSSTQPVSTDCDRTNARRMNESSEQIAVEGKDDASTLKISSLSINLKQDESKISTDA
ATKSDAVEVVNIGSVTVKVNKFTDSSGFLTVGTIPLNPKTPQLDEGGVSSKRGT
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgtaccaggaaggagcccctgagatcgttattgatcagggaatgtactaccctacagct
accaactatggatattattgtacaggttttgaatcacccgttgaatgggaggaccaccag
aatatttttagtgcagatggtccagatgtccaatttgcgggtgcccaaactgaacctttg
ccttatgtatattacacacctagctatggatatgcacagtctccatacaacccatacaat
ccttatatacctggtgccgtgatgggtgatggcccatttgtaggagcacaacaatattac
ccctttcctccttatcagaaccctgtatcaccaactgcttatgttcccgttctcattcaa
ccagatggcattccaagtagttcaacagactcttttttagatactcatgcttcaattggt
actagacctgatggaaggggcgtgagatataaccttgcttcggcatctgcagccacttcc
agaaaatctgctccaaatcgggcagattccatgagtagggtgacagatggacaaagtaag
cattatgctatccaggaaagcatttctgctagttctggttcagcttcagcacgtgctcat
caggttagagttgcttctggatccgttcagtccattggcaacattcctggtgggaaactc
ccaccttaccgtaatcaactaaaaacagatcttcctgttggtaataccatttctgactat
ggtgcaagttcacctggacgtggtgtgcttgatagactgcgacccaagatccatgttagc
agagttttcaatgatgcacatggatccccggattcatgggctgaacagaatcgaggccct
agaaccaaccgatcaaaaaatcaactcatggttaaagcctacacaagtaaagcaggaaat
agcgatgctgaaggaaacattattatctatactgaccaatataacaaggatgattttcca
attgactatgttgatgcaaagttttttgtaataaaatcgtatagtgaggatgatgtacac
aagagcattaaatataatgtctggtcttcaacaccccatgggaataggaaactggacagt
gcttttgaagatgcacagaaaatagctgcaggaaaacctagtggctgccccatcttcctc
ttcttttctgttaatgtcagtggacaattttgtggcgtagcagagatgattggtccagtt
gactttcagaaggatatggatttttggcagcaagataagtggagcggaagcttccctgtc
aagtggcacatcattaaagatgttcccaacagccattttagacacatcatattaggcaac
aatgaaaacaagccagtgactaatagcagggatacgcaagagataatgtacaagcaaggt
atggagatgctgaaagtattcaaaaatcatgcgatgaagacttctctacttgatgacttt
atgtactatgaaaatcgtcagagaatcatgcaggaagagaaagccatgcagctaattaaa
agcattgagaacccagtcctagcacctgcatttgatcctgtcaataagctaaaccatgtt
gagctactcctgaatgaacatgagagaagtaccaagcaaagtgatcctgaacgattgaga
acaattgttccttcatctactcagcctgtttctacagattgtgataggactaatgctaga
aggatgaatgaaagttcagagcaaattgcagttgaaggtaaagatgatgcatctacttta
aagattagttcactcagcataaatctgaagcaggatgagtctaaaatctctacagatgct
gctacaaaaagtgatgctgttgaggtggtaaacataggatcagtgacggtaaaagtcaat
aaatttactgactcatctggttttttaacagtaggcactattcctcttaatcccaagacc
ccacagcttgatgaagggggtgtgtcttctaaaaggggtacttga
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