Gossypium hirsutum (upland cotton): 107951777
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Entry
107951777 CDS
T04793
Name
(RefSeq) indole-3-acetic acid-amido synthetase GH3.6-like
KO
K14487
auxin responsive GH3 gene family
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
107951777
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Gene cluster
GFIT
Motif
Pfam:
GH3
GH3_C
GH3_M
Imm63
Motif
Other DBs
NCBI-GeneID:
107951777
NCBI-ProteinID:
XP_016742399
UniProt:
A0A1U8NWP7
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Position
D01:8764491..8766891
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AA seq
613 aa
AA seq
DB search
MPEAPKNTHKPTTDYNLELKNKKILQFIEDVTSNADEVQKKVLEEILSRNAHVEYLQTHG
LNGHTDRETFKTIMPVITYEDIQPYVDRIANGDTSPILSSHPISEFLTSSGTSGGERKLM
PTIEEELGRRSLLYSLLMPVMSQFVPGLDKGKGMYFLFIKSEAKTPGGLVARPVLTSYYK
STHFKDRPYDPYTNYTSPNETILCPDSYQSMYSQMLCGLCQHKEVLRVGAVFASGFIRAI
KFLEKHWRFLCNDIRTGTIDSQITDQSVREAVMKILKPDPQLADFIEAECSKDSWQGIIT
RLWPNTKYVDVIVTGTMSQYIPTLDYYTNGLPLVCTMYASSECYFGVNLNPLCKPSEVSY
TLIPTMAYFEFLPVQRNNGVNSSISVPKTLNEKEQQELVDLVDVKLGQEYELVVTTYSGL
YRYRVGDVLRVAGFKNNAPQFNFICRKNVVLCIDSDKTDEVELQNAVKNAVNHFLPFDAT
LAEYTSYADTTTIPGHYVLYWELSLNGTTPIPPSVFEDCCLTIEESLNSVYRQGRVCDKS
IGPLEIKIVEPGTFDKLMDYAISLGASINQYKTPRCVKFAPIVELLNSRAVSSFFSPKCP
KWFPGHKQWINMN
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgccagaagcacctaagaacacacacaaacctactacagattacaacctggaactgaag
aacaagaaaatccttcagttcattgaggatgtgacttcaaacgctgatgaagttcaaaag
aaagtccttgaagagattctttcacgcaatgctcatgttgagtacctgcaaacacatggc
cttaatggtcacactgatagagagactttcaaaacaatcatgcctgtcatcacctatgag
gatatccaaccttatgttgaccgtattgccaatggtgatacctctcccatactttcttcc
cacccgatttctgagtttttgacaagctctgggacatcaggtggtgagagaaagctgatg
ccaacaattgaagaggagttagggaggaggtcactgctctatagcctgttgatgcctgtt
atgagccaatttgtccctggtctagacaaaggcaaaggaatgtactttttgtttataaaa
tccgaggccaagacacctggtggcctggtggcacgccctgttctcactagctactacaaa
agcacccatttcaaggataggccatatgacccttacaccaactacactagcccgaatgaa
accatcctttgtcccgattcttaccaaagcatgtactctcaaatgctttgtggactttgc
caacacaaagaggtcctcagggtgggtgctgtttttgcctctggcttcatcagggccatc
aagttccttgaaaaacattggcgtttcctttgcaatgatataagaacaggaaccattgat
tctcaaatcactgaccaatctgtgagagaagctgttatgaaaatcctgaaacctgatcct
caacttgctgatttcattgaggccgagtgcagcaaagattcatggcaagggatcattacc
aggttatggcccaatacaaaatatgtggatgtgattgtgactgggaccatgtcacagtac
attcccactcttgattactacaccaatggcctccctctcgtctgcaccatgtatgcatcg
agtgaatgctattttggtgtcaacctcaaccctctttgcaagccaagtgaagtttcctac
actctcattcccacaatggcctactttgagttcttgccggttcaaaggaacaatggggtc
aatagttctatatcggtgcccaaaactctcaatgagaaggaacaacaagaactggttgac
ctggttgacgttaagcttggccaagaatatgaactcgttgtcaccacttattcagggctt
tatcgttatagagttggtgatgtgctaagggtagcagggttcaaaaacaatgcaccgcag
ttcaatttcatatgcaggaaaaatgtagttttgtgcattgattcagataagactgatgag
gttgaacttcaaaatgctgtgaagaatgcagtgaaccattttctgccattcgatgcaaca
ttggctgagtacactagttatgcagataccactacaattccaggccactatgtgctgtac
tgggaacttagtctcaatggtaccaccccaattcctccctcagtttttgaggactgttgc
ttgacaattgaagagtccctcaacagtgtataccgccaagggcgtgtatgtgacaaatca
attggaccccttgagatcaagattgttgaaccggggacatttgacaagctgatggattat
gccatcagcttaggtgcatcaattaaccagtacaagactccaagatgtgtgaaatttgct
cccattgttgagctgttgaactcaagggctgtgtctagcttcttcagtccaaaatgtccc
aaatggtttcctggccacaagcaatggatcaacatgaattaa
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