Gossypium hirsutum (upland cotton): 107951791
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Entry
107951791 CDS
T04793
Name
(RefSeq) pre-mRNA-splicing factor 18
KO
K12817
pre-mRNA-splicing factor 18
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107951791
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ghi03041
]
107951791
Spliceosome [BR:
ghi03041
]
Complex C
Other components
Step II factors
107951791
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prp18
PRP4
PolyG_pol
Motif
Other DBs
NCBI-GeneID:
107951791
NCBI-ProteinID:
XP_016742434
UniProt:
A0A1U8NWT2
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Position
A08:complement(12101878..12108604)
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AA seq
418 aa
AA seq
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MDLLKEELLKKRKSLAQDTGGKRVFKRSEIEQKQTQKLREQEKRELEAKSHRQSTASPSN
VSDTSAKPNPSAPSTASTIATSTAGSSKSLTDEQNIDNLDLPRQEVIRRLRFLKQPITLF
GEDDAARLERLKYVLKAGIFEVDSDMTDGQTNDFLRDIAELRKRQKTGILSDRKRKDREE
GEGGGEDREEEGGGGGGELSGDGGSSGVDMDKDLKRMKVNFDELCDEDKILVFFKRLLNE
WKQELDEMGEAEKRTAKGKSMVATFKQCARYLNPLFKFCRKKVLPDDILQALLVVVECCM
KRDYLAAMDHYIKMAIGNAPWPIGVTMVGIHERSAREKIYTNSVAHIMNDETTRKYLQSV
KRLMTFCQRRYPTLPSKAVEFNSLANGSDLQSLLAEERDSGVSSSDDKLRLMPTPTDT
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggatcttctcaaagaagagcttctcaagaaacggaaaagtttagctcaggatactggc
ggaaagcgcgtattcaaacgctccgagatagaacaaaagcaaacccaaaagcttcgcgag
caagaaaaacgcgaactcgaagcgaaatctcaccgccaatccactgcatccccctccaat
gtcagcgatacttccgccaaacctaacccgtccgctcccagcacggcatccacaattgca
acttccaccgccggttcctccaaatccctcaccgatgaacaaaacattgacaacctcgac
ctcccaaggcaagaagtcatccgccgccttcgcttcctcaaacagcctattacgctcttc
ggcgaagatgacgcagctcgtctcgaaaggttaaaatacgtcttaaaagcaggtattttc
gaggtcgacagcgacatgaccgacggtcaaaccaatgacttcttaagagacattgccgag
ctgcggaagcggcagaagacggggattttgagcgataggaagagaaaggatagggaagaa
ggggaaggaggaggagaggatagggaagaagaagggggaggaggaggaggagagttgagt
ggtgatggtgggtccagcggagtcgatatggataaggatttgaagagaatgaaggtgaat
ttcgatgagctgtgtgatgaagataagattctggtgtttttcaagaggttgttgaatgag
tggaaacaggagctggatgagatgggtgaggctgaaaagagaacggcaaaagggaagtcc
atggtagccacgtttaagcagtgcgctcgttacttgaatccattgttcaagttctgtagg
aagaaggtgcttcctgatgatatccttcaagcattgttggtggtggtcgaatgctgcatg
aagagggactacctggctgccatggaccattacattaagatggctatcggtaatgcaccc
tggccaatcggtgtcaccatggttggtatccatgaacgttcagctcgtgagaagatctat
accaatagtgttgcccacataatgaacgatgagactactcgcaaatacttgcaatcagtg
aaaaggctaatgaccttttgccaacgacgatatcctacccttccatctaaagcagttgag
ttcaacagcttggctaatggtagtgatttacagtcattgctagcagaagagagggactcc
ggggttagttcctcagatgacaagcttaggttaatgcccactccaacggacacctga
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