KEGG   Gossypium hirsutum (upland cotton): 107951837
Entry
107951837         CDS       T04793                                 
Name
(RefSeq) RAN GTPase-activating protein 1
  KO
K14319  Ran GTPase-activating protein 1
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    107951837
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ghi03019]
    107951837
Messenger RNA biogenesis [BR:ghi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     107951837
SSDB
Motif
Pfam: WPP LRR_6 LRR_1 LRR_4 DUF5423
Other DBs
NCBI-GeneID: 107951837
NCBI-ProteinID: XP_016742474
UniProt: A0A1U8NU63
LinkDB
Position
A08:12322298..12325880
AA seq 538 aa
MESGTQAFQQRSLSVKLWPPSHGTRLMLVERMTKNLTTPSIFSRKYGLLSNEEAEEDAKK
IEELAFAAADQHYKKEPDGDGSSAVQVYAKESSRLMLEAIKRGPTVKDEEIADKTSIHET
VFDISGGRRAFIDAEEAEEILKPLREPGNSYTKICFSNRSFGLDAANVAAPLLSSVKKQL
TEIDLSDFIAGRPESEALEVMNLFSSVLEGCQLRYLNLSNNALGEKGVRAFGALLKSQNN
LEELYLTNDGISEEAAQAVSELIPSTEKLKVLQFHNNMTGDEGAIAISDIVKRSHALEDF
RCSSTRVGTDGGVALAEALKTCTRLKKLDLRDNMFGVGAGVALSKALSLFAGLTEVYLSY
LNLEDDGAEALANALKESAPSLEVLDMAGNDITAKGTASLAACIASKQFLSKLNLAENEL
KDEGAILIGKSLGEGHGQLNEVDMSTNAIRRAGARLLAQVVVKIPGFKLLNINGNFISDE
GIDEIKELFKSSPDMLGSLEDNDPEGEDYEDEDEDEENAEEGNELESKLKDLKIEQGE
NT seq 1617 nt   +upstreamnt  +downstreamnt
atggaatctggaacgcaagcatttcaacaacgctcgctatcagtgaaattgtggccacct
agtcatggcacaaggctgatgcttgtagagcggatgacgaagaatcttacaaccccatcc
attttctctagaaagtatggcctattaagtaatgaagaggctgaggaggatgctaagaaa
atagaagagttagcttttgctgctgcagatcaacactacaagaaggagcctgatggtgat
ggtagttctgcagtgcaagtatatgccaaagaatccagtagactgatgctggaagctatt
aaaagaggccctactgtaaaggatgaagagatagctgataaaaccagtattcatgaaact
gtctttgatatatctggaggtcgcagggcatttatagatgcagaggaggctgaggagatt
ctgaagccacttagagagccaggaaattcatatactaagatatgttttagcaacagaagt
tttggcttggatgcagcaaatgttgctgcacccctcttgtcatccgttaagaaacaatta
actgagatagacctttcagattttattgctggaaggccagagtctgaagcacttgaagtc
atgaatcttttttcttctgtcctggaaggttgtcagttaaggtacctgaacctttcaaac
aatgccttgggtgaaaagggtgttcgggcatttggggctctcctgaagtcacagaataat
ttggaggagctttatttgactaatgatggtatttcagaagaagctgcacaagcagtttct
gagctaattccttctaccgaaaagctgaaagttcttcagtttcacaataacatgacaggg
gatgaaggtgcaattgctatctctgatattgtgaaacgttctcatgcattggaggatttc
cggtgttcatctacaagagttggcacagatggtggtgtggctctagctgaagcactgaag
acatgtacccgcttaaagaaacttgatctgcgtgacaacatgtttggcgtgggagctgga
gttgctttgagcaaagctctctctctgtttgcaggtcttactgaggtttacctcagttac
ttgaacctagaggatgatggggcggaagcacttgccaatgctctgaaagagtctgcacct
tcacttgaagttctggacatggctggaaatgacattacagccaaaggtacagcttcttta
gcagcctgcattgcatcaaaacaattcctctcaaaattaaacttggctgagaatgaactc
aaggatgaaggtgctattttgattggtaagtcattaggggagggtcatggtcagttgaat
gaagttgatatgagcacaaatgctattaggagagctggggcaaggcttttggcccaggtg
gttgtgaaaatacctggatttaagttgctgaatatcaatggaaatttcatatctgatgaa
gggatagatgagattaaagaattgtttaaaagttcccctgacatgcttggttctttggag
gacaatgatccagaaggagaagattatgaggatgaagacgaagatgaggagaatgcagaa
gaagggaatgaattggagtccaagcttaaggatctcaagatcgagcaaggagagtag

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