Gossypium hirsutum (upland cotton): 107951837
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Entry
107951837 CDS
T04793
Name
(RefSeq) RAN GTPase-activating protein 1
KO
K14319
Ran GTPase-activating protein 1
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107951837
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107951837
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
107951837
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WPP
LRR_6
LRR_1
LRR_4
DUF5423
Motif
Other DBs
NCBI-GeneID:
107951837
NCBI-ProteinID:
XP_016742474
UniProt:
A0A1U8NU63
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Position
A08:12322298..12325880
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AA seq
538 aa
AA seq
DB search
MESGTQAFQQRSLSVKLWPPSHGTRLMLVERMTKNLTTPSIFSRKYGLLSNEEAEEDAKK
IEELAFAAADQHYKKEPDGDGSSAVQVYAKESSRLMLEAIKRGPTVKDEEIADKTSIHET
VFDISGGRRAFIDAEEAEEILKPLREPGNSYTKICFSNRSFGLDAANVAAPLLSSVKKQL
TEIDLSDFIAGRPESEALEVMNLFSSVLEGCQLRYLNLSNNALGEKGVRAFGALLKSQNN
LEELYLTNDGISEEAAQAVSELIPSTEKLKVLQFHNNMTGDEGAIAISDIVKRSHALEDF
RCSSTRVGTDGGVALAEALKTCTRLKKLDLRDNMFGVGAGVALSKALSLFAGLTEVYLSY
LNLEDDGAEALANALKESAPSLEVLDMAGNDITAKGTASLAACIASKQFLSKLNLAENEL
KDEGAILIGKSLGEGHGQLNEVDMSTNAIRRAGARLLAQVVVKIPGFKLLNINGNFISDE
GIDEIKELFKSSPDMLGSLEDNDPEGEDYEDEDEDEENAEEGNELESKLKDLKIEQGE
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggaatctggaacgcaagcatttcaacaacgctcgctatcagtgaaattgtggccacct
agtcatggcacaaggctgatgcttgtagagcggatgacgaagaatcttacaaccccatcc
attttctctagaaagtatggcctattaagtaatgaagaggctgaggaggatgctaagaaa
atagaagagttagcttttgctgctgcagatcaacactacaagaaggagcctgatggtgat
ggtagttctgcagtgcaagtatatgccaaagaatccagtagactgatgctggaagctatt
aaaagaggccctactgtaaaggatgaagagatagctgataaaaccagtattcatgaaact
gtctttgatatatctggaggtcgcagggcatttatagatgcagaggaggctgaggagatt
ctgaagccacttagagagccaggaaattcatatactaagatatgttttagcaacagaagt
tttggcttggatgcagcaaatgttgctgcacccctcttgtcatccgttaagaaacaatta
actgagatagacctttcagattttattgctggaaggccagagtctgaagcacttgaagtc
atgaatcttttttcttctgtcctggaaggttgtcagttaaggtacctgaacctttcaaac
aatgccttgggtgaaaagggtgttcgggcatttggggctctcctgaagtcacagaataat
ttggaggagctttatttgactaatgatggtatttcagaagaagctgcacaagcagtttct
gagctaattccttctaccgaaaagctgaaagttcttcagtttcacaataacatgacaggg
gatgaaggtgcaattgctatctctgatattgtgaaacgttctcatgcattggaggatttc
cggtgttcatctacaagagttggcacagatggtggtgtggctctagctgaagcactgaag
acatgtacccgcttaaagaaacttgatctgcgtgacaacatgtttggcgtgggagctgga
gttgctttgagcaaagctctctctctgtttgcaggtcttactgaggtttacctcagttac
ttgaacctagaggatgatggggcggaagcacttgccaatgctctgaaagagtctgcacct
tcacttgaagttctggacatggctggaaatgacattacagccaaaggtacagcttcttta
gcagcctgcattgcatcaaaacaattcctctcaaaattaaacttggctgagaatgaactc
aaggatgaaggtgctattttgattggtaagtcattaggggagggtcatggtcagttgaat
gaagttgatatgagcacaaatgctattaggagagctggggcaaggcttttggcccaggtg
gttgtgaaaatacctggatttaagttgctgaatatcaatggaaatttcatatctgatgaa
gggatagatgagattaaagaattgtttaaaagttcccctgacatgcttggttctttggag
gacaatgatccagaaggagaagattatgaggatgaagacgaagatgaggagaatgcagaa
gaagggaatgaattggagtccaagcttaaggatctcaagatcgagcaaggagagtag
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