Gossypium hirsutum (upland cotton): 107951857
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Entry
107951857 CDS
T04793
Name
(RefSeq) polygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00040
Pentose and glucuronate interconversions
ghi01100
Metabolic pathways
Module
ghi_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
107951857
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
107951857
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
Motif
Other DBs
NCBI-GeneID:
107951857
NCBI-ProteinID:
XP_040942447
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Position
A02:88887817..88889548
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AA seq
412 aa
AA seq
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MAIQFNFVSSMLILVLLSISSVEGQGGGGGGVIDVVAKFGAKADEKTDLSKPLLDAWKEA
CASTSPSKIVIPKGIYFLSTATLDGPCKAPIELQVQGTVKAPADPGAFKEPKWIAFNRIE
NFKLSGGGVFDGQGTTAYKREGCKGHDYCGSLPINLRFDFLTNAMIQDITTKDSKQFQAN
VLGCKNITFEHFTVSAPDESPNTDGIHIGRSDGVNVLNSEIKTGDDCVSIGDGSKNLVIN
GVTCGPGHGISIGSLGLFKNEEPVDGVTVKNCTMTNTSNGVRIKTWPGAEPGTCSNIHFE
DITVTNVSSPIIIDQKYCPWNKCKINEESKVKLSNISFKNIHGTSARPEAVKIICSATLP
CENVELADIEITHSGPTGPAVSQCSNVKPKVSGKQNPAACSAPIPAKPTPTA
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggctattcaatttaattttgtttcatccatgttaatactagtacttctgtccatatca
tccgttgaaggtcaaggaggaggaggtggtggtgttattgatgttgttgcaaagtttggt
gcaaaggcagacgagaaaacagatttgagtaagccattattggatgcttggaaagaagca
tgtgcctcgacatctccgtcaaaaattgtgattcctaaagggatatattttttaagtaca
gctaccttagatggtccttgcaaggctcctattgagcttcaagttcaaggcactgtgaag
gctccggcagaccctggtgctttcaaggagcctaaatggattgctttcaatagaattgaa
aatttcaaattgtctggcggaggagttttcgacggccagggaaccactgcttataaaagg
gaaggttgcaaaggtcatgattattgtggttcacttcctattaacctaaggtttgatttt
ttaaccaacgcaatgatacaagatataactaccaaagacagcaagcagttccaggctaat
gttctaggatgcaaaaacattactttcgaacatttcaccgtatctgcacctgacgaaagc
ccaaacacagatgggattcacattgggagatcggatggggtcaatgttcttaactcggag
ataaaaactggtgatgattgtgtttcaattggggatggttccaaaaatttggttatcaat
ggagtaacttgtggaccaggacatggtatcagtattggtagtctcggattgtttaaaaat
gaagaaccagttgatggagttacagtaaaaaattgcaccatgactaatacttccaatggt
gttagaatcaaaacttggccaggtgctgaacctggcacttgttcgaacattcactttgag
gatattaccgtgaccaatgtcagttctcctattataattgatcagaaatattgcccatgg
aacaaatgcaaaataaatgaagaatcgaaagttaaactaagcaacattagtttcaaaaac
attcacggcacttctgcgcgtccagaagctgtcaagattatttgtagtgctactttgcct
tgtgaaaatgtagaacttgcagacattgaaattacgcatagtggaccgactggacctgca
gtatcacaatgttcgaatgtgaagcctaaagttagtggcaaacaaaatccagctgcatgt
tctgcccctatcccagcaaaacctaccccgaccgcttaa
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