Gossypium hirsutum (upland cotton): 107951858
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Entry
107951858 CDS
T04793
Name
(RefSeq) polygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00040
Pentose and glucuronate interconversions
ghi01100
Metabolic pathways
Module
ghi_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
107951858
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
107951858
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
NosD
Motif
Other DBs
NCBI-GeneID:
107951858
NCBI-ProteinID:
XP_040942475
UniProt:
A0ABM2ZL11
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Position
A02:89035638..89040462
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AA seq
334 aa
AA seq
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MAIQFNFVSSMLILVLLSISSVEGQGGGGGGVIDVVTKFGAKADEKTDLSKPLLDAWKEA
CASTSPSKIVIPKRIYFVSTATLDGPCKAPIELQVQGTVKAPADPGAFKEPKWISFNRIE
NFKLSGGGVFDGQGTTAYKREGCKGHAYYGSLPINLRFDFLTNAMIQDITTKDSKQFQAN
VLGCKNITFEHFTVSAPDESPNTDGIHIGRSDGVNVLNSEIKTGDDCVSIRDGSKNLVIN
GVTCGPGHGISIGSLGLFKNEEPVDGVTLKNCTMTNTSNGVRIKTWPCAEPDTCLNIHFE
DITVTNVSSPIIIDQKYCPWNKCKINVCTYLSKS
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggctattcaatttaattttgtttcatccatgttaatactagtacttctgtccatatca
tccgttgaaggtcaaggaggaggaggtggtggtgttattgatgttgttacaaagtttggt
gcaaaggcagacgagaaaacagatttgagtaagccattgttggatgcttggaaagaagca
tgtgcctcgacatctccgtcaaaaattgtgattcctaaaaggatatattttgtaagtaca
gctaccttagatggtccttgcaaggctcctattgagcttcaagttcaaggcactgtgaag
gctccggcagaccctggtgctttcaaagagcctaaatggatttctttcaatagaattgaa
aatttcaaattgtctggtggaggagtttttgacggccagggaaccactgcttataaaagg
gaaggttgcaaaggtcatgcttattatggttcacttcctattaacctaaggtttgatttt
ttaaccaacgcaatgatacaagatataactaccaaagacagcaagcagttccaggctaat
gttctaggatgcaaaaacattactttcgaacatttcaccgtatctgcacctgacgaaagc
ccaaacacagatgggattcacattgggagatcagatggggtcaatgttcttaactcagag
ataaaaactggtgatgattgtgtttcaattagggatggttccaaaaatttggttatcaat
ggagtaacttgtggaccaggacatggtattagtattggtagtctcggattgtttaaaaat
gaagaaccagttgatggagttacattaaaaaattgcaccatgactaatacttccaatggt
gttagaatcaaaacttggccatgtgctgaacctgacacttgtttgaacattcactttgag
gatattaccgtgaccaatgtcagttctcctattataattgatcagaaatattgcccatgg
aacaaatgcaaaataaacgtatgtacatatttatcaaaatcgtaa
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