KEGG   Gossypium hirsutum (upland cotton): 107951899
Entry
107951899         CDS       T04793                                 
Name
(RefSeq) DNA-repair protein XRCC1 isoform X1
  KO
K10803  DNA-repair protein XRCC1
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    107951899
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ghi03400]
    107951899
DNA repair and recombination proteins [BR:ghi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     107951899
SSDB
Motif
Pfam: BRCT PTCB-BRCT BRCT_2 RTT107_BRCT_5
Other DBs
NCBI-GeneID: 107951899
NCBI-ProteinID: XP_016742559
UniProt: A0A1U8NUN3
LinkDB
Position
A02:88146041..88153473
AA seq 367 aa
MSDSKTSQGGGAGKTQTRNLPSWMSSRENESKSHGNKSNDAKGHDKGHASSSNNTNFSKL
LEGVVFALSGFVNPERSTLRSQALAMGAEYQPDWNSNCTLLVCAFQNTPKFRQVEADCGT
IISKEWILECYAQKKLVDIDPYLMHAGKPWRRSSISHETSQGVLAEKQGSSLTKSYKKVE
ETQSKTTSGPSKNKASQLAQDRFSPPKVKKWVMDDFNETISWLESQEEKPEPQEIKQVAG
EGILTCLQDAIDCLAQKQDVQQITEQWSFIPRVVKELAFLDASNHGSLTKEDLLREAKVC
KQIYEDELSRINSGSLKRKRPKTDGGEEGNKGETKAIFASGYDSDETIKMTEEEIELAYK
NFNSGTL
NT seq 1104 nt   +upstreamnt  +downstreamnt
atgtctgattcaaaaacaagccaaggtggcggtgctggaaagacccagactcgaaatctt
ccatcatggatgagttcaagagagaatgaaagtaaatcccatggaaacaagtccaatgat
gccaaaggacatgataaggggcatgcttctagttctaacaacaccaacttttccaaactt
ttggaaggggtggtctttgcattgtcaggatttgttaatccggaacgtagtacattacgt
tcccaggctttggcaatgggagctgaatatcagcctgactggaattcaaattgcacgctt
ttggtatgtgcttttcaaaataccccgaagtttcgacaagttgaagctgattgtggaaca
attatatcaaaggaatggatattagaatgttatgcacagaaaaagcttgtcgatattgat
ccttacctcatgcatgctgggaaaccttggcgaagaagtagcatttctcatgaaactagt
caaggcgtgcttgcagaaaaacaaggatcgtcattaacaaaatcttacaagaaggttgaa
gaaacacaatcaaagacaacttctggtccctccaagaataaagcatctcagcttgctcag
gacagattttctcctcctaaagtgaagaagtgggtaatggatgattttaatgaaactatt
tcatggctggagagtcaagaggaaaagccagaaccgcaggagataaagcaagtagctgga
gaagggatcttaacttgtttacaagatgccatagattgtcttgcgcaaaagcaggatgtg
cagcaaattactgagcagtggagcttcatccctcgtgtggtcaaggagcttgccttctta
gatgccagtaaccatggctcactcaccaaggaagatcttttgagagaggccaaggtatgc
aagcaaatatacgaggatgaattaagccggataaacagtggttctttgaaaagaaaaagg
ccaaagactgatggaggtgaagaaggcaacaagggtgaaaccaaagccatttttgcatca
ggttatgacagtgatgaaacaatcaagatgacggaggaagaaatcgagcttgcttataaa
aatttcaattctggaactttgtaa

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