Gossypium hirsutum (upland cotton): 107951910
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Entry
107951910 CDS
T04793
Name
(RefSeq) uncharacterized protein LOC107951910 isoform X1
KO
K17925
sorting nexin-13
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ghi04990
]
107951910
Domain-containing proteins not elsewhere classified [BR:
ghi04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
107951910
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
Motif
Other DBs
NCBI-GeneID:
107951910
NCBI-ProteinID:
XP_040941066
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All DBs
Position
A02:87223864..87231389
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AA seq
1131 aa
AA seq
DB search
MDMPKQVTVRDLVEEARKRIVIFAICVVGLSYLMSLTSSSVLVNLPAAASLIILLRYISI
DYEMRRNAAVNNRKCASMSSLTPKQPPEHPKVVDPSDWRRKVNSPIVEDAIDHFTRHLIS
EWVTDLWYSRLTPDREGPEELVLIINGVLGELSDRMKNINLIDLLTRDLINLICTHLELF
RVNKAKIEKQQSIPLTIEHQDAAIRRVMAAENKLHPALFSTEAEHKVLQHLMGGFISFTF
KPEDLQCSFFRYVARELLACAVMRPVLNLVSPRFINERIESAIISMTKAKGVDAAEGASQ
YKSNGSSRIPSDHFSKFLDPSVTGVELVQLKTDQSRAAGGTTATDNLNRAHLMKDPLLSM
DTRSSHSWSSVTLNSQTSAGKGIEQHRTGGEWGDMLDIISRRKTEVLAPENFENMWTKGR
NYKKKEKRLIEQVPQHYSAGSPATVDHSKAISKTREKCPTKLNTSDRCAAQSTLTDQRKI
EKLFLKEASNVSYYSSVASWQEDDERSLVDLEEVESESSDSFSSEEETGTVTGIGSPGTK
VWDGKSNRNLAVSHIHHPLENPEGHMAKKAGRRHVQYRRLTRTPSSRKRSRLTCQKLPVW
QEVDRSSFISGDGQDILNSPNGHEKADDSSNNSETEFFGRLHSGATASLSAASISSHSLT
INSLQNSLVVDSFFKLRCEVLGANIVKSGSKTFAVYSISVTDVNNNNSWSIKRRFRHFEE
LHQRLKQFPEYKLHLPPKHFLSTGLDVHVIRERCKLLDGYLKNLLQLPTISGSIEVWDFL
SVDSQTYVFSNSFSIIETLSVDLDSNPSEKSNKASSVLVPLVGPLSSKGEQLDTESKESA
RQMKPNLAMDGLRNAKNMSYPPKVLTKEQGNSIEDSGSNSDTGMSKISFVRHTEKNVKGK
ANDGMEDASELVLDAVSHPTFPTEWVPPNLSVPILDLVDVIFQLQDGGWIRRKAFWVAKQ
ILQLGMGDAFDDWLIEKIQMLRKGSVVASGIERLEKILWPDGIFITKHPRQQRPPSSSGP
SKASPCSPLPPETCSSRLGDEQQQLEAERRAKFVYELMIDNAPAAIVGLVGRKEYEQSAK
DLYFFIQSSVCLKLLAYDLLELLLLSAFPEMEYVFKQFHVEKHKFGEFKSN
NT seq
3396 nt
NT seq
+upstream
nt +downstream
nt
atggacatgccaaagcaggtgacggttcgtgacttggtggaggaagccaggaagcggatc
gtgatttttgctatctgcgtcgttggattgtcctatctcatgtcactgacaagttcctca
gttttggttaatcttcctgctgctgcctccttaatcattctcctacgatacatttcaata
gattatgaaatgcggaggaacgctgctgtaaacaacagaaaatgtgcatcaatgagttca
ttgactccaaaacaaccaccagagcatcctaaagttgttgatccttctgattggagaagg
aaagtgaattctcctattgtagaggacgcaatagatcacttcacaagacatcttatatct
gagtgggtgacagatctatggtattctcgtttaacacctgatagggaaggcccagaagaa
ctggtgctgatcataaatggtgttcttggggagctttcagaccgcatgaaaaatataaat
ctcatcgatttactcacaagggaccttattaatctcatttgtactcacttggagcttttt
cgtgtgaataaagcaaaaattgaaaagcaacaatctataccgctgactattgaacatcaa
gatgctgcaataagacgtgttatggctgcagagaacaaactgcacccagctttattctct
actgaagctgagcacaaggtgttgcaacatttgatgggtggttttatatctttcacattc
aaacctgaagatctgcaatgttctttctttcggtatgttgccagggaacttctggcttgt
gcagtaatgcgaccagtcttaaacttagtgagtccaaggtttataaatgagagaattgaa
tctgctattatatctatgaccaaagctaaaggagtcgatgctgcagaaggtgcatctcaa
tacaaatcaaatggctcctcaaggatcccttctgatcatttttctaagtttctagatcct
tctgtaactggtgttgaactggtacaattaaaaactgatcagtccagagctgctggaggc
accactgcaacagataacctaaacagagcacatctaatgaaggatccactgctttccatg
gatactcgatcttcccattcttggagctctgtgactttgaactctcaaactagtgctgga
aaaggtatcgagcaacatcgtacaggaggagaatggggtgatatgttagatatcatttcc
cgtagaaagactgaggtacttgctccagaaaattttgagaacatgtggacaaaagggaga
aactacaaaaagaaggaaaaacgattgattgagcaagttcctcagcattactctgctggg
agccctgctacagtggatcattcaaaagcaatatctaagacaagagagaagtgtcctacc
aagcttaacacatctgataggtgtgcagctcaatctacattaactgatcagcgcaaaata
gaaaaattattcctaaaagaagctagcaatgtatcgtactactcttcagttgcatcttgg
caggaagatgatgaacgcagccttgttgatttggaggaggttgaatcagaaagcagtgat
tctttttcttcagaagaagaaacaggaactgtaacgggtattggttctccaggaaccaaa
gtttgggatggcaagagtaacagaaatctggcagtttcgcatattcatcatccacttgaa
aatcctgaaggccatatggcaaagaaggctggtagaaggcatgttcagtatcgaagatta
accagaaccccatccagcagaaaaagatcgagattgacctgtcagaagttgcctgtctgg
caagaggtggataggtctagctttatatcaggggatggacaggacatacttaattcaccg
aatggacatgagaaagctgatgactccagcaataattctgagactgaattctttggtaga
cttcacagtggagctactgcttctttgtctgctgcttctatctctagtcatagtttgact
attaattccttgcaaaactcgttggtggtagattctttctttaaattgagatgtgaggtt
ttgggtgcaaatattgtgaagagtggctccaaaacatttgctgtttattccatatctgtt
acagatgtaaacaacaataatagctggtcaataaagagaagattccgacattttgaggag
ttgcatcaacgtcttaaacaatttccagagtataaacttcacttgcctccaaagcatttt
ctctcaacaggtttggacgttcatgtaatacgagaacggtgtaaattgcttgacggatat
ttaaagaatctcctgcagcttcctactatttcaggatcaattgaagtttgggacttccta
agtgttgactcccagacatatgtattctcaaattctttttctatcattgagacattgtca
gttgaccttgacagtaatccatctgaaaagagcaacaaggcctcaagtgttttggtgcct
ctggtgggtcctttatcttctaagggagaacagttagacactgaaagcaaggaatctgca
cggcagatgaagccaaatcttgcaatggatggattaagaaatgcaaaaaatatgtcttat
cctccaaaagttctcactaaagaacagggtaactccattgaagattcaggcagtaattct
gatactggaatgtcaaagatttcatttgtaagacacacagagaagaatgttaaaggaaaa
gcgaatgacggaatggaagatgcttctgagttggttcttgatgctgtttcgcacccaacc
tttcctacagagtgggtgcccccaaatttaagtgtccccattttagatttggtggatgtc
attttccagctccaagatggcgggtggatcaggaggaaggctttttgggtggccaaacaa
atcctacaacttggaatgggtgatgcttttgatgattggctgatagaaaagatccagatg
ctgcgcaagggctcagttgttgcttcaggaatcgagcgtcttgagaagatactttggcct
gatggtatattcataaccaaacatccaaggcaacaacgtccgccatcatccagtggccct
tccaaggcttcaccttgcagtccgctacctcctgaaacatgttcatctagattgggtgat
gagcagcaacaactagaagcagaacgtcgtgcaaaattcgtatatgagctaatgattgac
aatgcaccagctgctattgtgggtcttgttggtcgcaaggagtatgaacaatctgctaag
gacctctatttcttcattcagtctagtgtttgtttgaagctgctggcatatgatcttctt
gagctcttgctgttgtctgcatttccagagatggagtatgtattcaagcagttccatgta
gaaaaacacaagtttggtgagtttaaatcaaactaa
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