Gossypium hirsutum (upland cotton): 107951986
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Entry
107951986 CDS
T04793
Name
(RefSeq) vacuolar protein sorting-associated protein 45 homolog isoform X1
KO
K12479
vacuolar protein sorting-associated protein 45
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
107951986
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107951986
Membrane trafficking [BR:
ghi04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
107951986
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Gene cluster
GFIT
Motif
Pfam:
Sec1
PCRF
Motif
Other DBs
NCBI-GeneID:
107951986
NCBI-ProteinID:
XP_016742676
UniProt:
A0A1U8NUM2
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Position
A02:complement(55279532..55286409)
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AA seq
568 aa
AA seq
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MVLVSAVRDYVYRMLQDISGMKVLILDSQTVSIVSVVYSQSELLQKEVFLVELIDSISKS
KESMSHLKAVYFLRPTSENIQYMRRQLSNPRFGEYHLFFSNMLKDTQIHLLADSDEQEVV
QQVQEFYADFIAVDPYHFTLNMPSNHYYILPAVVDPSNLQHFCDRAVDGIGAVFLALKRR
PIIRYSRASDIAKRIAQETAKLMYQQESGLFDFRRMEMSPLLLIVDRRDDPVTPLLNQWT
YQAMVHELIGIQDNKVDLRSIGKFPKDQQEVVLSSEQDAFFKANMYENFGDIGMNIKRMV
DDFQQVAKSNQNIQTIEDMAKFVDNYPEYRKMHGNVSKHVTLVTEMSKIVEERKLMLVSE
TEQDLACNGGQVAAFEAVTNLLNNESVSDIDRLRLVMLYALRYEKESPVQLMQLFNKLAS
RSAKYKPGLVQFLLKQAGADKRTGDLYGNRDFLNIARNMARGLKGVENVYTQHQPLLFQT
MESIIKGRLRDVDYPYVGNHFQQGRPQEVVIFIVGGTTYEESRSVAQLNASNSGIRFILG
GTAVLNSKRFLKDLEEAQGIARSNANVV
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggtgctggtgtcggccgtacgggattatgtttatcggatgttgcaagacatctccggc
atgaaagtcctcattcttgattctcaaacggttagcattgtgagtgttgtttattcccaa
tcagagctacttcagaaagaagtctttttggtagaattgatagactccatctccaagtca
aaagaatctatgtcgcatctcaaggcagtttatttccttcggcctacatcagaaaatatt
caatatatgcggcgtcaactatctaaccctaggtttggagagtatcacttgtttttctca
aacatgttgaaggatactcagattcatcttttagctgattcagatgaacaggaagttgtt
cagcaagtccaggagttttatgcagacttcattgcagttgatccttatcacttcacttta
aacatgccttcaaatcactattatattctcccagcagttgtggacccttctaatttgcag
catttctgtgaccgagctgttgatggtattggtgcagttttcttggcattaaaacggaga
ccaattattagatattcaagggcatctgatattgcaaaaaggattgcgcaagaaacagca
aagctaatgtaccagcaagaaagtggtctttttgacttcaggcggatggaaatgtctccg
ttgctgctgatagttgacagaagggatgatcctgtgactccattgctgaaccaatggacc
tatcaggcaatggttcatgaattgataggtattcaggataacaaagtggatttgagaagc
attggaaaatttcccaaagaccaacaggaagtcgtgctttcatcagaacaagatgctttc
ttcaaagctaacatgtatgaaaactttggagatattggaatgaatatcaagcggatggtg
gatgattttcagcaagttgctaaaagcaaccaaaatatacagacaatagaagacatggcc
aaatttgtagacaattacccggagtacagaaaaatgcatgggaatgtttcaaagcatgtc
acattggtaacagaaatgagcaagatagttgaggagagaaagcttatgttggtttctgaa
actgagcaggatttggcttgcaatggggggcaagttgctgcttttgaggcagtgacaaat
cttttaaacaatgaaagtgtatctgatattgaccgacttcgcctggtaatgctgtatgct
ttgcgctacgagaaggagagtcctgtccagttaatgcagctatttaacaaactggcatct
cggtctgccaaatacaagcctgggcttgtgcaatttctcctaaagcaagcaggggccgat
aagcgtactggtgatctttatggaaatcgtgattttctaaatattgctcgcaacatggct
cgtggactgaagggggttgagaatgtgtacacccagcaccagcctcttcttttccaaact
atggaaagcataatcaaaggacgactgagagatgtggactacccatatgttggaaatcat
tttcagcagggcaggccacaggaggtggttatattcatcgttggtggaacaacttatgag
gaatcacgctctgttgctcagctaaatgccagcaattctggaattcgttttatacttggt
ggaacagcagttctcaattctaagaggtttctcaaggacttagaagaagctcaggggata
gctcgaagcaatgccaatgttgtttaa
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