KEGG   Gossypium hirsutum (upland cotton): 107951990
Entry
107951990         CDS       T04793                                 
Name
(RefSeq) F-box protein SKP2B
  KO
K03875  F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    107951990
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ghi04121]
    107951990
Ubiquitin system [BR:ghi04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     107951990
SSDB
Motif
Pfam: DUF7885 LRR_6 LRR_4 LRR_At5g56370 LRR_Zer-1 F-box-like F-box LRR_At1g61320_AtMIF1
Other DBs
NCBI-GeneID: 107951990
NCBI-ProteinID: XP_016742683
UniProt: A0A1U8NX85
LinkDB
Position
A02:complement(55987327..55991094)
AA seq 372 aa
MIGEEKVRSEDLNLCFEKLMMVAAGNSGGGVKRKGAVITEWKDIPMELLLRIVSLVDDRT
AIVASGVCSGWRDAICLGLTHLCLSWCRKNMNNLVLSLAPKFTKLLTLVLRQENPQLEDT
AVETIAKFCHDLQDLDLSKSFKLGDHSLYALAHGCPNLTKLNISGCTSFSDEGLGYLTQF
CRKLKILNLCGCVKAATDCALQAIGQNCNMLQSLNLGWCDNVGDLGVMSLAYGCPDLRCL
DLCGCVRITDDSVIALANGCLHLRSLGLYYCRNITDRAMYSLAHSRVKNKASIWQSMKGR
YDEEGLRSLNISQCTALTPSAVQALCDTFPALHTCSGRHSLVMSGCLNLTSVHCACAVQS
HRTLNSILHTAH
NT seq 1119 nt   +upstreamnt  +downstreamnt
atgataggtgaagaaaaggtgcgaagtgaagacttgaacttgtgctttgagaagctgatg
atggttgctgctggaaatagtggtggaggagttaagaggaaaggtgcggtgatcactgag
tggaaagatattcctatggagctgttgttgagaattgtttcccttgtcgatgatcgaact
gctattgttgcttctggtgtttgtagtgggtggagggatgctatttgcttgggccttacc
catctttgtctctcatggtgcaggaagaacatgaacaacttggttctatcccttgctcct
aaatttaccaaattgctaactctcgtactacgccaagaaaatccgcagcttgaggacact
gctgttgagacgattgcgaaattctgtcatgatctgcaggatctggacctcagcaaaagt
ttcaagcttggtgatcactcattgtatgctttggcccatggttgccctaatcttacaaaa
cttaacatcagtggctgcacatcattcagtgatgaaggtcttggatatttgactcaattt
tgtcgaaaactaaaaatattaaatctctgtggatgtgttaaagctgcaactgactgcgca
ttgcaggctattggacagaactgcaatatgttgcaatctttaaatctgggatggtgtgac
aacgttggtgatctaggagttatgagtctagcatatggatgccctgatctcagatgcctt
gacttgtgtggctgtgtccgcataacagatgatagtgtgattgctttggcaaatgggtgt
ctccatttgaggtcgcttggtctgtactattgccggaatatcacagaccgggcaatgtac
tcactggctcacagccgagtgaagaacaaggcttcaatctggcagtccatgaagggtaga
tatgatgaggaagggcttagaagtctgaatataagccagtgtactgcactgactccttca
gccgttcaggcattatgtgatacgttccctgctcttcacacctgctctggaaggcattcc
cttgtcatgagcggctgcttgaacttaacgtccgtgcattgcgcttgtgcggtgcaatca
caccgcacactaaacagtattctccatacagctcattga

DBGET integrated database retrieval system