KEGG   Gossypium hirsutum (upland cotton): 107951998
Entry
107951998         CDS       T04793                                 
Name
(RefSeq) coatomer subunit beta'-2-like
  KO
K17302  coatomer subunit beta'
Organism
ghi  Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ghi04131]
    107951998
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ghi04147]
    107951998
Membrane trafficking [BR:ghi04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    107951998
Exosome [BR:ghi04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   107951998
SSDB
Motif
Pfam: B-prop_COPA_B_2nd TPR_COPA_B WD40 WD40_Prp19 WD40_WDHD1_1st WDR55 Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_WDR75_1st Beta-prop_EML EIF3I WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EIPR1 Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd ANAPC4_WD40 Beta-prop_SCAP NBCH_WD40 WDR90_beta-prop_4th PEP5_VPS11_N Beta-prop_IFT140_1st Beta-prop_HPS5 Beta-prop_WDR19_1st WD40_RFWD3 Beta-prop_IFT122_1st Beta-prop_WDR35_TULP_N Beta-prop_SPT8 Beta-prop_DCAF4 WD_LRWD1 TPR_CcmH_CycH TPR_2 Beta-prop_DCAF12 TPR_8 Ge1_WD40 PH_SPO71 HEAT_GCN1
Other DBs
NCBI-GeneID: 107951998
NCBI-ProteinID: XP_016742694
UniProt: A0A1U8NXI9
LinkDB
Position
D03:complement(14484973..14495999)
AA seq 891 aa
MPLRLEITRKLSQRSERVKSVDLHPTEPWILASLYSGTLCIWNYQSQTMAKSFEVTELPV
RSAKFVARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTRPYILSSSDD
MLIKLWDWEKGWVCTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPNPNFT
LDAHQKGVNCVDYFSGGDKPYLITGSDDNTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPD
LPIIITGSEDGTVRIWHATTYRLENTLNYGLERVWALGSMKGSRRIVIGYDEGTIMVKIG
REVPVSSMDDSGKIIWAKHNEIQTVNIKSVGTNIEVTDGERLPLTVKELGTCDLYPQSLK
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEFIWSPDGEYAVRESTSKIKIFSKNFQ
EKRIVQPTFSAEHIFGGTLLAMCSSDFICFYDWAECRMIRRIDVTVKNLYWADSGDLVAI
AGDTSFYILKYNRDVVQSYLDSGRQVDEQGVEDAFELLHETNERVRTGIWVGDCFIYNKT
SWRLNYCVGGEVTTMFHLDRPMYLLGYLASQSRVYLIDKEFNVMGYTLLLSLIEYKTLVM
QGDLERANEILPSIPKEHHNSVAQFLESQGMIEDALEVATDPDYRFDLAMQLGKLEIAKE
IATEAQSESKWKQLGELAMSTGKLSMAEECMKHAIDLSGLLLLYSSLGDAEGISRLASLS
KEQGKNNVVFLCLFMLGKLEDCLQLLVESNRIPEAALMARSYLPSKVSEIVTIWRKDLNR
VNPKAAESLANPQEYPGMFENWKVALDVETRVREKRGVYPPAADYLKHADRSWLTLVEAH
ENGDLNHVAAEQNGDDGSQEEAVVVDAFSESAVLFNSNEPEEEWGTNKGAL
NT seq 2676 nt   +upstreamnt  +downstreamnt
atgccactcagacttgaaattacgaggaaactttctcaaagatcagagagagtaaaatcc
gtagatctccatccaacagaaccatggattctagcaagtttgtattctggaactctgtgt
atctggaactaccagtcacagaccatggctaagtcatttgaggtcactgagttgccagtt
aggtcggccaagtttgttgctcgcaagcaatgggttgttgctggagctgatgacatgttt
attcgtgtatataattacaacactatggataaggtcaaagtttttgaggcacatactgat
tacattagatgtgtggctgtccatcctactcgtccatatatattgtcatcatctgatgat
atgctcataaaactctgggactgggagaagggttgggtgtgtactcagatatttgagggt
cactctcattatgttatgcaggtgacttttaatcccaaagacactaacacttttgccagt
gcatctctagaccgtaccataaagatttggaatcttggctcccccaacccaaactttact
ttggatgcccatcagaaaggtgtaaattgtgttgattattttagtggtggtgataagccc
tatctaatcaccggttctgatgataacactgctaaggtatgggactaccaaaccaagagt
tgtgttcagacattggaaggtcacacacacaatgtttctgcagtttgtttccatcctgac
cttccaattatcattactggttctgaggacgggacagttcgtatctggcatgctaccact
tataggcttgaaaatacactgaattatggccttgaaagagtttgggcacttggatctatg
aaaggttcaaggaggattgtgattgggtatgacgaaggaactattatggtgaaaattggt
cgtgaagtacctgtatcaagtatggacgacagtggaaaaatcatatgggctaagcacaat
gaaattcaaactgtgaatattaagagtgtagggacaaatattgaggttactgatggagaa
aggttgcccttgactgttaaggaattggggacttgtgatctataccctcaaagcttaaag
cataacccaaatgggaggtttgttgttgtctgtggagatggtgagtatatcatatataca
gctttggcttggagaaataggtcatttggttcagcattggaattcatttggtcacctgat
ggagagtatgctgttagagagagcacatctaagattaagattttcagcaaaaatttccag
gaaaagaggattgtccagccaaccttctctgcagagcatatttttggaggcactttacta
gcaatgtgctccagtgattttatttgtttttacgattgggctgaatgcaggatgattcgt
cgaattgatgttactgtgaaaaatctatactgggctgatagtggtgatttggtggcaatt
gccggcgatacatctttctatatccttaaatacaatcgggatgtggttcaatcttactta
gatagtggaagacaagttgatgaacaaggggttgaggatgcatttgaacttcttcatgaa
accaatgaacgggtcaggactggcatatgggttggggactgtttcatttacaacaaaact
tcatggagacttaattactgtgttggtggagaggtgaccacaatgtttcatttggatcgt
cctatgtacttgttgggatatcttgcaagccaaagtcgggtatatttgatagacaaagag
tttaatgttatgggttatacattacttctcagcctgattgagtacaagacccttgtgatg
caaggagacttggaaagggccaatgaaatattaccttcaattcctaaggaacaccataat
agtgtggctcagttcctggaatcacaaggtatgatagaggatgctctagaagttgctact
gaccctgattacagatttgatcttgccatgcagcttggtaaactagagattgctaaggaa
atagccacagaagctcagagcgagtctaaatggaagcagttgggagaattggctatgtca
actggaaagttgtcaatggctgaggaatgcatgaaacatgcgatagacctgagtggttta
ttgctgctttattcctctttgggagatgccgaaggaatatcaaggctagcatccctttct
aaagagcaagggaagaacaatgttgttttcctttgtttattcatgctgggtaaattggag
gactgcctccaacttttggtggaaagcaatcggatacctgaggcagctcttatggcacga
tcttatcttccaagcaaggtttcagagatagtgactatttggagaaaagacctcaacagg
gttaacccaaaagctgctgaatctttggccaatcctcaagagtatccaggcatgtttgag
aattggaaagttgctcttgatgttgaaactagagtgcgagagaaaaggggtgtttatcct
cctgcagcagactatttgaaacatgctgatagatcatggctgacacttgtggaggctcat
gaaaatggtgaccttaatcatgtggctgcagaacaaaatggagatgatggtagccaagag
gaggctgttgttgtggatgcatttagtgagagtgcagtactttttaatagtaacgagcct
gaagaagagtggggtacgaataaaggagccctgtga

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