Gossypium hirsutum (upland cotton): 107952129
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Entry
107952129 CDS
T04793
Name
(RefSeq) LOW QUALITY PROTEIN: serine/threonine-protein phosphatase PP1
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107952129
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ghi01009
]
107952129
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ghi03021
]
107952129
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107952129
03041 Spliceosome [BR:
ghi03041
]
107952129
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
107952129
Protein phosphatases and associated proteins [BR:
ghi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
107952129
Transcription machinery [BR:
ghi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
107952129
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
107952129
Spliceosome [BR:
ghi03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
107952129
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
DUF316
Motif
Other DBs
NCBI-GeneID:
107952129
NCBI-ProteinID:
XP_016742897
UniProt:
A0A1U8NVB9
LinkDB
All DBs
Position
A02:50096875..50100720
Genome browser
AA seq
321 aa
AA seq
DB search
MDENLLDNIIRRLLGTKNGRTTKQVQLTEAEIKQLCAASKECFLSQPNLLELEAPIKICG
DVHGQFSDLLRLFEYGGYPPTANYLFLGDYVDRGKQSIETICLLLAYKIKYKENFFLLRG
NHECASINRIYGFYDECKRRFNVRVWKLFTECFNCLPVAALIDEKILCMHGGLSPDLKNX
DQIRSISRPVDVPDQGLLCDLLWADPDKDLDGWGENDRGVSYTFGADIVSEFLKKHDLDL
ICRAHQVVEDGYEFFAKRQLVTIFSAPNYCGEFDNAGAMMSVDDSLTCSFQILKSLEKKG
KGGFGNNTFRPGTPPHKGGKR
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggacgagaatttgcttgataacatcataaggaggctgctggggacgaagaatgggagg
actacaaagcaagttcagttgacggaggctgagataaagcagctttgtgctgcctccaaa
gagtgctttcttagtcagcctaatcttctcgagcttgaagcccctatcaagatttgtgga
gatgttcacggtcaattttctgatcttctacgtttgtttgagtatggaggatatccgcct
acagcaaactatttattcctaggtgactatgttgatcgtggcaagcagagcatcgaaaca
atttgccttctcctagcatacaaaatcaaatacaaagagaatttttttctccttaggggc
aaccatgaatgtgcatcaattaaccgtatatatggtttctatgatgagtgcaaaagaagg
tttaatgttcgtgtctggaagttgtttacggaatgctttaattgcctacctgttgctgct
ctaattgatgagaagatcctttgcatgcatggtggattatctcctgacttgaaaaatntg
gatcagatccgtagcatttctcgccctgttgatgtgccagatcagggccttctctgtgat
cttctttgggctgatcctgataaagatcttgatggctggggagagaatgataggggagtt
tcatatacatttggggctgacatagtttctgaattccttaagaaacatgaccttgatctc
atttgccgagctcaccaggttgtagaagatggctatgagttctttgcaaagcgacagttg
gtgaccatattctctgctccaaactactgcggggaatttgataatgcaggtgccatgatg
agtgtggatgatagtttaacatgttcgtttcagattcttaaatctttagagaagaaagga
aagggtggatttggcaacaacacattcagaccaggaactccacctcacaagggtgggaag
cgctga
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integrated database retrieval system
