Gossypium hirsutum (upland cotton): 107952160
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Entry
107952160 CDS
T04793
Name
(RefSeq) protein argonaute 10 isoform X1
KO
K11593
eukaryotic translation initiation factor 2C
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107952160
03036 Chromosome and associated proteins [BR:
ghi03036
]
107952160
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
107952160
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
107952160
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
107952160
microRNA pathway
RISC loading complex
107952160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
107952160
NCBI-ProteinID:
XP_016742929
UniProt:
A0A1U8NY67
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All DBs
Position
A10:55383683..55392316
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AA seq
994 aa
AA seq
DB search
MPIRQMKDNSEQHLVIKNHLQNTMNPIQRTPKTAQNGKGPAAGHEPHNTKQSRNHTSPPT
KNKGRRRGRGGRKSDQGDVCMRPSSRHCTVAQKPVNPGSADILAATSNGSIQNDHNLPGM
EMGFPTSSKSLNFASRPGFGQVGTKCIVKANHFFAELPDKDLNQYDVTITPEVTSRTMNR
AIMAELVKLYKESELGMRLPAYDGRKSLYTAGEFPFSWKEFSVKLVDEDDGINGPKRERE
YKVVVKFVARANMHHLGQFLAGKRADAPQEALQILDIVLRELSTKRYCPIGRSFFSPDIR
APQRLGDGLESWCGFYQSIRPTQMGLSLNIDMASAAFIEPLPVIEFVAQLVGKDLLSRPL
SDSDRVKIKKALRGVKVEVTHRGNVRRKYRVSGLTSQPTRELVFPVDDNSTMKSIVEYFQ
EMYGFTIQHTHLPCLQVGNQRKANYLPMEACKIVEGQRYTKRLNERQITALLKVTCQRPR
DREHDILQTVQHNAYDQDPYAKEFGVKISEKLASVEARILPAPWLKYHETGKEKDCLPQV
GQWNMMNKKMINGMTVSRWACINFSRSVQESVARGFCIELAQMCQVSGMEFNPEPVIPIY
SARPELVEKALKHVYNASMNKTKGKELELLLAILPDNNGSLYGDLKRICETDLGLISQCC
LTKHVFKISKQYLANVALKINVKTGGRNTVLLDAISCRIPLVSDIPTIIFGADVTHPENG
EDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYKTWQDPARGTVSGGMIRDLL
VSFRKATGQKPLRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIVVQKR
HHTRLFANSHRDRSSTDKSGNILPGTVVDSKICHPAEFDFYLCSHAGIQGTSRPAHYHVL
WDENNFTADGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPEMQENGSNS
CSNGQNKGTRVVGESGVRPLPALKENVKRVMFYC
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atgcctataaggcaaatgaaagataactcagagcaacaccttgtgataaagaatcacttg
caaaacactatgaacccgattcaaagaacgccaaagactgcacaaaatggaaaaggtcca
gcagcaggtcatgaaccacacaacacaaaacaatcccgtaaccacacctcacctccaacg
aagaacaaaggaagaagaagaggaagaggtggtagaaaatctgatcaaggcgatgtttgt
atgagaccgagttcgaggcactgcacggtagcacagaagccagtgaatcctggttctgct
gatattttggctgctacttcaaatgggtctattcagaatgatcataatttgcctggaatg
gaaatggggtttcctacttcaagcaagtctttgaattttgcatctaggcctggttttggt
caagttggaaccaagtgtattgtaaaggctaaccatttctttgctgagttaccagacaag
gacttaaaccagtatgatgttactataactcctgaagtgacatcccgaacgatgaacaga
gctataatggcagagcttgtgaaattgtacaaagaatcagagctaggaatgagattacct
gcttatgatggccgaaagagtctgtacacagctggtgaatttccattttcgtggaaggag
tttagtgtcaagcttgtagatgaagacgatggcatcaatggccccaagagagaaagagaa
tataaagtggtagttaagtttgttgcacgagcaaacatgcatcatttaggccaatttcta
gctggtaagcgcgctgatgctccacaagaagcactgcagatacttgacattgtgttacga
gagttatcaacaaagaggtattgtcctattgggagatccttcttttcacctgatattaga
gcaccgcaaaggcttggtgacggtttggagtcatggtgcggtttttaccagagtattagg
ccgacacagatgggcttgtctctgaatattgatatggcttcggctgccttcattgagcca
ctccctgttatagagtttgttgctcagctagtaggcaaggatttattgtcaaggccattg
tctgattctgatcgtgtgaagattaaaaaggcactcagaggagtgaaagtcgaggtaacc
catagagggaatgtacgtagaaaataccgtgtttcaggattgacttctcagcctactaga
gagttagtgtttcctgttgatgataattcaaccatgaagtctattgttgaatacttccaa
gagatgtatggctttacaattcagcatacacatctaccttgtcttcaagtaggaaaccaa
agaaaggcaaactatttacctatggaggcttgcaaaattgttgagggacagcgatacaca
aaaagattgaatgaaaggcaaattactgctctcttgaaagtcacatgccaaagaccaagg
gatcgggagcatgacattttgcagacggttcaacataatgcttacgaccaagatccttac
gcaaaggagtttggggtcaaaatcagtgaaaagcttgcttcagtcgaggcacgaatcctt
cctgccccttggctgaaatatcatgaaactggaaaagaaaaggattgtctgcctcaagtt
gggcagtggaatatgatgaacaagaaaatgatcaatgggatgactgttagccgatgggca
tgtattaacttctcacgaagtgtgcaagagagtgttgctcgtgggttttgcattgaactt
gctcaaatgtgccaagtttctggcatggagttcaatccagagcctgttattccaatctac
agtgccaggcctgagctagtggaaaaagccttgaagcatgtttataatgcatccatgaat
aaaaccaagggaaaagaattagagcttctattagctatattacctgacaacaatggatca
ctttatggtgatctgaagcgaatttgtgaaactgatctaggcttgatatcacaatgctgt
ctcacaaaacatgtcttcaagatcagtaaacagtacttggctaatgttgccctgaagatc
aatgttaagacgggtggcagaaacactgttcttttggatgctattagttgcagaatacca
ctagttagtgatataccaacgataatatttggtgcagatgtgactcaccccgaaaatgga
gaagactccagcccctcaatagcagctgtagtagcttcacaagactggcctgaagtgaca
aaatatgctggactagtatgtgctcaagctcatagacaggaacttatacaggacttgtac
aaaacatggcaggaccctgcacgtggcacagttagtggtggcatgatcagggatcttctg
gtatcctttaggaaggcaacagggcagaagccactgaggattatattttacagggatggt
gtcagtgaagggcaattttatcaagttctgctttatgaactagatgcaatccggaaggct
tgtgcttctctagaaccgaactatcaaccaccggtgactttcattgttgtacaaaaacga
caccacactcgcctctttgctaacagtcacagggaccgaagcagcacagataagagtgga
aacattttaccaggcactgttgttgattcgaaaatctgtcatccagcggaatttgatttt
tacctttgcagtcatgctggtattcagggaacaagccggccagcgcactaccatgttctt
tgggatgaaaacaattttacagcagacggtatacagtctctaacaaacaacctttgttac
acatatgcaaggtgtacgcgctcagtctcagtcgttcctcctgcatattatgcacattta
gctgcattccgtgcacggttctacatggaaccagagatgcaagagaatgggtcgaacagc
tgcagtaatggtcaaaataaaggtacaagggtagtgggagaatcgggggtgcggccattg
ccagccttgaaggagaatgtgaagagagtgatgttctactgttag
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