Gossypium hirsutum (upland cotton): 107952226
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Entry
107952226 CDS
T04793
Name
(RefSeq) LOW QUALITY PROTEIN: formin-like protein 20
KO
K28090
formin
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ghi04812
]
107952226
Cytoskeleton proteins [BR:
ghi04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Formins
107952226
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FH2
PTEN_C2
IL11
INT1_R3
Herpes_UL51
Motif
Other DBs
NCBI-GeneID:
107952226
NCBI-ProteinID:
XP_040940156
LinkDB
All DBs
Position
A12:complement(98481835..98494855)
Genome browser
AA seq
1513 aa
AA seq
DB search
MALFRRLFYRKPPDRLLEISERVYVFDCCFSTDVLEEDEYKVYMGGIVAQLQDHFPDASF
MVFNFREGEKRSQISDILTQYDMTVMDYPRQYEGCPLLPLEMIHHFLRSSESWLSLEGQQ
NVLLMHCERGGWPILAFMLSGLLLYRKQYTGEQKTLEMIYKQAPRDLLQLLSPLNPQPSQ
LRYLQYISRRNLGSDWPPSDTPLFLDHLILRVLPLFEGGKGCRPAVRVYGQDPETPANRS
SKLLFSTSKTKKQIRHFLKEECAMVKIDIHCRIQGDIVLECIHLDEDLVREEMIFRVMFN
TAFVRANVLTLYRDEIDVLWDAKDQFPKDFIAEVLFSDPDAVVPGLTRVVASDDGNEIES
ASPEEFFEVEEIFSNAVDAVEGKVDDSSLIVPHNKPDQKDVWREDGDPPTFQDCASDDGN
HKHDTKVYSSIDAVKDIAVDDVNYKLDKISSDINTVKDIAVDDGDMKIDSVVFTVDVLRD
RETKEVIEDVIDKLEEMQDKGNRAHIIPLKKSESKMFEQRLKTDVSQPKPEKLLSASKKQ
AALDPKPALDSVLLKPKNDQLEPQGPARQAKPNIISRWIPPNNGSYTNSMHVSYPPSRYN
SAPPVLSSITSDSGSNRKGSIGAVILEDVSSEQKSQMVEPFKSTDSPKEIFTTPIIPTST
TGLQQSVSIPLPPPHIPSPPPPPPPPPPPPPPPPLSRTSLAASPPPPPPPRPPPPLLFPS
IPPSTLQSGKYAEYRYGFTTCICSSSSPSSSPSHVFCSSSSPPPPPIPGAMTPSFTRGVP
SPPPPPPPPSMTTAPTTPLXPPPPPPPPPPPPPPPTRHGASLQSSHYGALPPPPPPMPSH
HGASPAPPLSQGTPATTPPPPPRFGAPPPPPPPSLKSTAPPPPPPPPLMSSAPPPPSLLP
SVPGPPPPPPPPPPPSVSSAPPPKFGVPPPPPPPLRGAPPPPPPRGAPPPPPPPARGEPA
PPPPPMRGAPAPPPPPMRGAPPPPPGGAPPPPPPPGGRAPGPPAPPGAPRGAPPPPPLGA
RAADVRGRGRGLSRPGAAAAPRRSSLKPLHWSKVTRAIQGSLWEELQRYGEPQIAPEFDV
SEIETLFSAVVPKPADSGGKSGGQRKSAGSKPDKVHLIDLRRANNTEIMLTKVKMPLSDM
MAAVLAMDDTVLDVDQVENLIKFCPTKEEMELLKGYSGDKENLGKCEQLVNKEPSQGSCT
SNDRNMCLGINFEKNGRFVLITMRSWYLVILSNISNILFLFPYVFVCVSINYICKDILSS
LRVSVNGSARVLFGADDLQISEFRKSLNTVNSACNEVRNSVKLKEIMKKILYLGNTLNQG
TARGSAIGFKLDSLLKLTDTRASTSKMTLMHYLCKVLAAKAPALLDFHLEFVSLEAATKI
QLKSLAEEMQAIIKGLEKLKQELVASENDGPVSEVFRKTLKEFISVAETEVVSLTNLYSM
VGRNADALALYFGEDPARCPFEQVTATLLNFVRLFRKAHEENVKQAELDKKKAEKEAEME
KAKEANLKKKSAK
NT seq
4542 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgttcagacgcttgttttaccggaagccgccggatcggcttctcgagatctca
gaacgtgtctacgtatttgactgctgcttctccacggatgtgttggaagaagatgagtac
aaggtgtatatgggtggcattgtggcacagctacaagaccattttccagatgcttctttc
atggtgtttaatttcagagaaggggagaagcggagccaaatttcagacattttaactcag
tatgatatgactgttatggattacccacggcaatatgagggatgccctctgcttccgctt
gaaatgattcatcacttccttcgctcgagtgaaagctggttgtctttggaagggcagcag
aatgtgcttctgatgcactgtgaaagaggaggatggcccatacttgctttcatgctttct
ggtcttctgttatatcgcaaacagtacactggtgagcagaagactcttgaaatgatctac
aagcaagctcctcgggaccttctccaacttctttctcctttgaatccacagccatcccag
ttgagatatcttcagtatatttcaagaagaaatttgggttctgattggcctccctcagat
acaccactatttttggatcacctaattcttagagtacttcccctctttgaagggggaaaa
gggtgcaggccagctgtacgtgtttatggccaggaccctgaaacaccagccaatagaagt
tccaagcttctgttttcaacttcaaagacaaaaaaacaaattcgtcacttcctaaaggaa
gagtgtgcaatggtgaaaatagatattcattgccgtattcaaggggatattgtgcttgag
tgcattcatttggatgaagatttggtacgcgaagagatgatcttcagagttatgtttaac
acagcttttgttcgagcaaatgttttgacgttataccgtgatgagattgatgtgttgtgg
gatgccaaggatcaatttccaaaggacttcatagcagaggtacttttttcggatcctgat
gctgttgtacctggtctcaccagagtagtagcaagtgatgatgggaatgagatagaaagt
gcttcaccagaggaattttttgaggttgaagagatcttcagcaatgcagttgatgcagtg
gaaggaaaggtggatgacagcagtctgatagtccctcacaacaagccagatcagaaagat
gtctggagggaggatggggatcctccaacatttcaagattgtgcgtcagatgatgggaac
cacaaacatgacacaaaggtttattctagtatagatgcagtgaaggacatagcagtggat
gatgtgaattacaaattagataagattagttctgacattaatactgtgaaggatatagca
gttgatgatggagacatgaagattgactcagtggtatttactgttgatgtgctgagagat
agagaaacgaaggaagttatagaagatgtgattgacaaattagaagagatgcaagataag
ggaaatagagctcatattattccattgaagaagtcagagtctaagatgtttgagcagagg
ttgaaaactgacgtttcccaacctaaacctgagaaactattgtctgcttcaaagaaacag
gctgcgctggacccaaaaccagctttagattctgttttgttgaaaccaaagaacgatcaa
ctggaacctcagggtcctgcaagacaagcaaagccaaacatcatatctcggtggatccct
cctaacaatggctcttataccaattcaatgcatgtatcttacccaccatcaagatataac
agtgcaccgcctgtactttctagcatcacatctgattcaggttcgaatcgtaagggctct
attggagctgtgatactagaggatgtttcatctgagcaaaaaagtcagatggttgagcct
tttaagtctacagactctccaaaagaaatatttaccactccaataattccaacatcaact
actggtttgcagcaatcagtgtctattccacttccacctccgcacataccatccccacca
ccaccaccaccaccaccgccgccgccgcctcctcctcctcctctatctagaacgtctctt
gcagcatcacctccccctcctcctcctccccgccctccccctcccctcctcttcccctcc
atccctccatccaccttacaaagtggcaaatatgcagaatatcggtatggtttcacaacc
tgcatttgcagctcctcctccccctcctcttccccctcccacgttttctgttcctcctcc
tccccccctcctccaccaattccaggtgctatgactccatctttcacgcgaggagtgcca
tcacccccaccccctccccctccgccttccatgactacagctccaactacccccttgnnc
ccccccccaccaccaccaccaccaccaccaccaccaccaccacctactagacatggagct
tcacttcaatcttctcattatggagctttgccacctcctccaccaccaatgccttctcat
catggggcttctccggcaccacctctttctcaaggaacaccagctacaaccccaccaccc
ccgcctaggtttggtgcccctcctccacctccaccaccctcattgaagtccactgcccca
cctccaccccctccaccgccattgatgtctagtgccccacctccaccttcattgctccca
tcagtgcctggtcctccacctccacctccacctccacctcccccatcggtgtctagtgcc
ccacctccaaaatttggagtccctcctccaccccctccccctttgcgtggagcaccacct
cctcctcccccacgtggagctccacccccaccacctccacctgctcgtggagaaccagca
ccgcccccccctcctatgcgtggggcacctgcaccgcccccgcctcctatgcggggggct
cctccacctcctccaggtggagcaccacctccaccgccacctcctggaggtcgagctcct
ggccctccagctccacctggagctcctcgtggtgcacctccgcctccaccattgggtgct
agagcagccgatgtgagaggaagagggcgtgggctatcgcgtcctggagctgctgctgca
cctcggagatcttccttaaagccattacactggagcaaggttacaagggcaatacaagga
agcttatgggaagaattgcaaagatatggagagcctcaaattgcacctgaatttgatgtg
tctgagattgagactcttttctctgctgttgttcctaaacctgctgattctgggggtaaa
tctggaggccaacgcaaatctgctggatcaaaacctgacaaagtccacttgattgacttg
aggagggccaacaacactgaaattatgctcactaaagtcaagatgccactttctgatatg
atggctgcagtgctagcaatggatgatacagtattagatgtagatcaagtggaaaatctg
ataaagttttgcccaactaaagaggaaatggaacttctcaagggctacagtggtgacaag
gagaatctaggaaagtgtgaacagctagtaaataaagagccttcccaaggaagctgcaca
agcaatgacagaaacatgtgtcttggcattaactttgagaaaaatggtaggtttgtcttg
ataactatgaggagttggtatcttgtcattttatctaatatctctaacatcctttttctt
tttccttatgtatttgtatgtgtgtctataaattacatttgtaaggatatattgtcatca
ttaagggtatcagtgaatggaagtgcaagagtactttttggagctgatgacctccagatt
tctgaatttagaaagagcttaaacacagtaaattctgcatgtaatgaggtacggaattct
gttaaattaaaggagatcatgaagaaaattctctatctgggaaatacattgaaccaagga
accgcaaggggttctgctattggatttaagttggacagtcttctaaagctcacagataca
cgtgcttcaacaagcaagatgacgctgatgcattatctttgcaaggtcctagctgccaag
gcaccagcacttctagattttcacctggaatttgttagccttgaggctgcaactaagata
caattaaaatctttagcagaagaaatgcaagctataattaagggattagaaaagcttaag
caggaactggttgcctccgaaaatgatggtcctgtgtccgaagttttccggaagacatta
aaggaatttatttctgttgctgaaacggaggtggtgtcgttaacaaatctatattctatg
gtgggtagaaatgcagatgcacttgcactctattttggtgaggatcctgcccgatgcccg
tttgagcaagttactgcaacccttttaaattttgtgcggctgtttcggaaagcacatgaa
gagaatgttaaacaggctgaactggacaagaagaaagccgagaaggaggctgaaatggag
aaagccaaggaagccaaccttaaaaagaagagtgcaaagtag
DBGET
integrated database retrieval system
