Gossypium hirsutum (upland cotton): 107952374
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Entry
107952374 CDS
T04793
Name
(RefSeq) polygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00040
Pentose and glucuronate interconversions
ghi01100
Metabolic pathways
Module
ghi_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
107952374
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
107952374
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Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Motif
Other DBs
NCBI-GeneID:
107952374
NCBI-ProteinID:
XP_016743123
UniProt:
A0A1U8NYI0
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Position
A02:complement(65323860..65324683)
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AA seq
228 aa
AA seq
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MIQYITTKDSKQFHVNVLGCKNITFEHFTLSAPDESPNTDGIHIGRLDGVNVLNSEIKTD
DNCVPIGDGSKNLVINGVTCGLGHGISIGSLKLFKNEEPVDRVTVKNYTMTNTSNGVRIK
SWLGAEASTCLNIHFEDIIMTNEESKAKLSNISFKNIHGTSARPEAVKIICSSTMPCENV
ELADIEITHSAPTRPAVSQCSNVKPKVSGKQNLAACSAPIPAKPTSTA
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgatacaatatataactaccaaagatagcaagcagttccatgttaatgttctaggatgc
aaaaacattactttcgaacatttcaccttatctgcacctgacgaaagcccaaacacagat
gggattcacattgggagattagatggggtcaatgttcttaactcagagataaaaaccgat
gataattgtgttccaattggggatggttccaaaaatttggttatcaatggagtaacttgt
ggactaggacatggtatcagtattggcagtctcaaattatttaaaaatgaagaacccgtt
gatagagttacagtaaaaaactacaccatgactaatacttccaatggtgttagaatcaaa
agttggctaggtgctgaagctagcacttgtttgaacattcactttgaggatattatcatg
accaatgaagaatcaaaagctaaactaagcaacattagtttcaaaaacattcacggcact
tctgcgcgtccagaagctgtcaagattatttgtagttctactatgccttgtgaaaatgtg
gaacttgcagacattgaaattacgcacagtgcaccgactagacctgcagtatcacaatgt
tcaaatgtgaagcctaaagttagtggcaaacaaaatctagctgcatgttctgcccctatc
ccagcaaaacctacctcgaccgcttaa
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