KEGG   Gossypium hirsutum (upland cotton): 107952374
Entry
107952374         CDS       T04793                                 
Name
(RefSeq) polygalacturonase-like
  KO
K01213  galacturan 1,4-alpha-galacturonidase [EC:3.2.1.67]
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi00040  Pentose and glucuronate interconversions
ghi01100  Metabolic pathways
Module
ghi_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    107952374
Enzymes [BR:ghi01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.67  galacturonan 1,4-alpha-galacturonidase
     107952374
SSDB
Motif
Pfam: Glyco_hydro_28
Other DBs
NCBI-GeneID: 107952374
NCBI-ProteinID: XP_016743123
UniProt: A0A1U8NYI0
LinkDB
Position
A02:complement(65323860..65324683)
AA seq 228 aa
MIQYITTKDSKQFHVNVLGCKNITFEHFTLSAPDESPNTDGIHIGRLDGVNVLNSEIKTD
DNCVPIGDGSKNLVINGVTCGLGHGISIGSLKLFKNEEPVDRVTVKNYTMTNTSNGVRIK
SWLGAEASTCLNIHFEDIIMTNEESKAKLSNISFKNIHGTSARPEAVKIICSSTMPCENV
ELADIEITHSAPTRPAVSQCSNVKPKVSGKQNLAACSAPIPAKPTSTA
NT seq 687 nt   +upstreamnt  +downstreamnt
atgatacaatatataactaccaaagatagcaagcagttccatgttaatgttctaggatgc
aaaaacattactttcgaacatttcaccttatctgcacctgacgaaagcccaaacacagat
gggattcacattgggagattagatggggtcaatgttcttaactcagagataaaaaccgat
gataattgtgttccaattggggatggttccaaaaatttggttatcaatggagtaacttgt
ggactaggacatggtatcagtattggcagtctcaaattatttaaaaatgaagaacccgtt
gatagagttacagtaaaaaactacaccatgactaatacttccaatggtgttagaatcaaa
agttggctaggtgctgaagctagcacttgtttgaacattcactttgaggatattatcatg
accaatgaagaatcaaaagctaaactaagcaacattagtttcaaaaacattcacggcact
tctgcgcgtccagaagctgtcaagattatttgtagttctactatgccttgtgaaaatgtg
gaacttgcagacattgaaattacgcacagtgcaccgactagacctgcagtatcacaatgt
tcaaatgtgaagcctaaagttagtggcaaacaaaatctagctgcatgttctgcccctatc
ccagcaaaacctacctcgaccgcttaa

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