Gossypium hirsutum (upland cotton): 107952407
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Entry
107952407 CDS
T04793
Name
(RefSeq) pleiotropic drug resistance protein 1-like isoform X1
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
107952407
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ghi02000
]
107952407
Transporters [BR:
ghi02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
107952407
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
AAA_29
AAA_25
AAA_16
AAA
AAA_28
RsgA_GTPase
DnaB_C
Motif
Other DBs
NCBI-GeneID:
107952407
NCBI-ProteinID:
XP_040942512
UniProt:
A0ABM2ZK13
LinkDB
All DBs
Position
A02:89804879..89817119
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AA seq
1306 aa
AA seq
DB search
MGILSSRKKKLTILKDVSGIIKPGRMTLLLGPPSSGKTTLLLALAGKLDTALKCSGTVTY
NGHEMNEFVPQRTAAYISQHDLHIGEMTVRETLAFSARCQGVGDRYNMLAELSRREKQAN
IKPDPDIDVFMKAAATEGQEANVITDYILKVLGLEICADTMVGDEMLRGISGGQKKRVTT
GEMLVGPARALFMDEISTGLDSSTTFQIVNSLKQTVHILNGTAVISLLQPAPETYDLFDD
IILISDGRIVYQGPREHVLSFFESMGFRCPERKGIADFLQEVTSRKDQMQYWARRDQPYR
FVTTDEFAEAFQSFHVGLQLEDELRTPFEKTKSHPSALTTKKYGVGKWKLLKACVSREFL
LMKRNSFVYIFKFIQLTFMAIVTMTLFLRTEMNRDSIAEGGIYMGAIFFGLIMVMFNGMS
ELSMTIAKLPVFYKQRDLLFFPAWVYALPSWILKIPITFVEVALWVFLTYYVIGFDPNVQ
RFFRQYFALVLANQMSSGLFRFIAATARNMIVANTFGSFALLVLFALSGFVLSRDDIKSW
WIWGYWISPMMYGQTALMVNEFRGNQWSHSLPGSTEAAGIDVLKSRDFFQEPKWYWIGVG
GLIGFIILFNFFFTVALTYLNPFGSSRAVISEQTESHEQTDGVGVGGSIQLTNNESSSNN
VTSSAIREEVQRSISSKSSSVTEATIGTISIKKKGMVLPFEPHSITFDNVVYSVDMPQEM
KEQGITEDRLVLLKGVSGPFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIDGNITISG
FPKKQETFARVSGYCEQNDIHSPHVTVYESLLYSAWLRLPAEVKAETRKMFIEEVMELVE
LNPLRQAIVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVR
NTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGQEIYVGPLGHHSKHLIKYFEGIQGVS
KIKDGYNPATWMLEVTTTAQELALGVDFTVIYKNSDLYRRNKVLIEDLSKPAPGSKELHF
PTQYSQSFLTQCVACLWKQHWSYWRNPPYTAVRFLFTTVIALMFGTMFWDLGSKMNRGQD
LTNAMGSMYAAVLFLGVQNSSSVQPVVAVERTVFYRERAAGMYSAMPYAIWQVIIEMPYI
FIQAATYGLIVYAMIGFEWTAAKFFWYLFFMYFTLLYFTFYGMMAVAVTPNYHIASIVSA
AFYGIWNLFSGFIIPRPSMPVWWQWYYWACPVAWTLYGLFVSQFGDIKTPLEDGDFVGQS
VEQYLRSRYGFRHDFLGVVVAVILGLAVLFASIFTVSIKLFNFQRR
NT seq
3921 nt
NT seq
+upstream
nt +downstream
nt
atgggcattctttctagtagaaagaaaaagctgacaatcctcaaagacgtcagtggaatc
attaagcccggcaggatgacattgcttttgggtcctccaagttctgggaaaaccactctc
ttgttggctttagctgggaagcttgatactgctcttaagtgttctgggacagtgacctac
aatgggcatgagatgaatgagtttgtgccccagagaacagctgcctatattagtcaacat
gatcttcatataggagaaatgacagtgagggaaactttggccttttctgcgagatgtcaa
ggcgttggagatcgttacaatatgttggcagaattatcaagaagagagaaacaagcaaat
attaaacctgatcctgatattgatgtcttcatgaaggcagcagcaacagaaggtcaagag
gcaaatgttattacagattacattctaaaggttttaggattggaaatatgtgcagacact
atggtaggtgatgaaatgttaaggggtatatctggtggacaaaagaagcgtgtcaccaca
ggtgaaatgctggttggaccggcaagggcactatttatggatgagatatctactggtcta
gatagctctacaactttccagattgtgaactccctcaagcaaactgttcatatccttaac
ggaactgcagtcatttctcttctccaaccagcaccagagacttatgatcttttcgatgac
attattctcatttccgatggccggatagtatatcagggtcctcgtgaacacgtgctgagc
ttcttcgaatctatgggcttcaggtgtcctgaaagaaaaggcattgcagacttcttgcaa
gaagttacatcaaggaaagatcaaatgcagtattgggcacgtagagatcaaccttacagg
tttgtcacgaccgatgagtttgctgaggcatttcaatctttccatgttggattgcaactt
gaagatgaacttcggactccatttgagaaaacaaagagccacccctctgctttgacaacc
aaaaaatatggtgttggaaagtggaagttgctgaaagcttgcgtctcaagggagtttctg
ctaatgaagagaaactcttttgtctacatcttcaagtttattcagcttacatttatggca
atagttactatgactctctttttgagaactgagatgaaccgagattcaattgctgaggga
ggaatctatatgggggccattttttttggcttgattatggtcatgtttaatggaatgtct
gagctttctatgaccattgctaagcttcctgtcttttacaagcaaagagacctgttattc
tttcctgcatgggtatatgctctaccatcatggatactcaagattcccatcacatttgta
gaagttgccctatgggtatttctcacctattatgtcatcggatttgatccaaatgttcaa
aggttttttaggcaatacttcgcactcgttctcgctaaccagatgtcttcggggttgttt
cgcttcattgcagcaactgctagaaacatgattgttgctaacacttttggctcatttgct
ttgctcgtactttttgcattgagtggctttgtcctatcacgagatgacataaagagctgg
tggatatggggttactggatttctcctatgatgtatggacaaaccgcattgatggttaat
gaattccgtgggaaccagtggagtcattctcttccgggttcaaccgaagcagcaggaatc
gatgttttgaagtccagggatttctttcaagaaccaaaatggtattggataggtgtagga
ggattgattggtttcataatattgttcaacttttttttcactgtggctctcacctatcta
aatccatttgggagttcaagggctgtaatttcagaacaaacggaaagccatgaacaaacc
gatggagttggagttggtggaagcatacagttaacaaacaatgaaagtagctcaaataat
gtaactagctcagcgattcgagaggaggttcaaagaagcatctcatcgaagtcctcgtct
gtgactgaggcaactatcgggaccatttccatcaagaaaaagggcatggttcttccattt
gagccacattccatcacatttgataacgttgtttattctgttgatatgccgcaggaaatg
aaagaacaaggtattactgaagataggttggtgctactgaagggtgttagtggtcctttc
agaccaggcgttcttacagctctaatgggtgttagtggtgcgggcaaaaccactcttatg
gatgtgcttgctggtagaaaaaccggtggttatatagatgggaacatcactatttcaggt
ttcccgaagaaacaagaaacatttgctcgagtatctggatactgtgaacaaaatgatatt
cactctcctcatgtcacagtgtacgagtctttgctctattctgcttggcttcgactacct
gctgaagttaaagctgaaactagaaagatgttcattgaggaagtcatggaactcgtggaa
ttgaatccgttaaggcaagcaatagttggtttacctggtgtaaatggtttatcaactgaa
cagcgaaagaggcttacaattgcagttgagcttgtggcaaacccttcgatcattttcatg
gacgagccaacttcagggcttgatgcaagagccgcggcaattgttatgagaacagttagg
aacacggtggacaccggaagaacagttgtatgtactattcatcagccaagtattgacata
tttgaagcatttgatgagctattccttatgaagcgaggaggacaagaaatatatgtcggg
ccattaggacaccattctaagcatcttatcaagtacttcgagggaattcaaggagttagc
aaaatcaaagatggatataatcccgcgacttggatgttagaagttaccacaacagcgcaa
gaattagctttaggtgttgattttactgttatctacaaaaattcagatctgtacaggaga
aacaaagttcttattgaagacttaagcaagcctgctcctggttcaaaggaactccatttt
ccaactcaatactctcagtcattcttgactcagtgtgtagcttgcttatggaagcaacac
tggtcatattggcgcaacccaccatataccgctgttagatttctttttacaactgtaata
gcattgatgtttgggacaatgttctgggacctgggctcaaaaatgaataggggacaagat
ttaaccaatgcaatgggttcaatgtatgctgctgtacttttccttggcgtccaaaattct
tcatctgtgcagcctgttgttgctgttgaaagaacggtcttttatcgagaaagagctgct
ggaatgtattctgccatgccatatgccatttggcaggtcattattgagatgccttacatt
tttattcaagctgctacgtatggcctaatagtctatgctatgatcggattcgagtggacc
gctgcaaagttcttctggtatctcttcttcatgtactttaccttattgtacttcaccttc
tatggcatgatggccgttgctgttacgccaaactaccacattgcgtcaattgtttctgct
gcattctacggaatatggaacctcttttcagggttcatcatcccacgaccgagcatgcct
gtatggtggcaatggtactattgggcttgtccagtagcatggaccttgtacggattgttt
gtttctcaatttggagatataaaaacaccccttgaagatggagactttgttggtcagtca
gtggaacaatatttgagaagtcgatacggtttcagacatgattttctgggagttgtagta
gctgtaattcttggtttggctgttctatttgcttccatctttactgtgtccattaagctc
tttaatttccaaagacgttag
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