Gossypium hirsutum (upland cotton): 107952787
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Entry
107952787 CDS
T04793
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-3
KO
K03265
peptide chain release factor subunit 1
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107952787
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107952787
03012 Translation factors [BR:
ghi03012
]
107952787
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
107952787
Translation factors [BR:
ghi03012
]
Eukaryotic type
Release factors
107952787
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
107952787
NCBI-ProteinID:
XP_016743451
UniProt:
A0A1U8NWW6
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Position
A07:81447759..81450847
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AA seq
436 aa
AA seq
DB search
MADGHETDKNIEIWKIKKLIKALESARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASN
IKSRVNRQSVLAAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFKPIN
ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHG
RGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVAGLILAGSADFKTELSQS
DMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKYFEEISQDTG
KYVFGIDDTLKALEMGAVETLIVWENLEINRYMLKHSVTGEIIIKHLNKEQEADQSNFRD
PETSAELEVQEKMPLLEWFANEYKRFGCSLEFVTNKSQEGSQFCRGFGGIGGILRYQLDI
RSFDELSDGEVYEDSE
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggcagatggtcatgaaactgacaagaacatcgagatttggaaaataaaaaagctaatc
aaggcactagaatctgccaggggaaatgggaccagcatgatatccctcattatgcctcct
cgtgatcaaatatcccgtgtcacaaagatgttaggtgacgaatttggaactgcatcgaac
atcaaaagtagggtcaaccgtcagtctgtgttggctgccattacttctgctcaacagagg
ttgaagctctataacaaggttccccctaacgggctggtgctctacactgggacaattgtt
actgaagatggcaaggaaaagaaggtgacaattgactttgaacctttcaaacctattaat
gcatctttgtacctctgtgataacaagttccatactgaagctttgaatgagcttttagag
tctgatgacaagtttggatttatagtcatggatggtaatggcacgttatttggtacgtta
agtggaaacacaagagaggttcttcataagttcactgtggatctaccaaagaagcatgga
agaggaggacagtcagcccttcgatttgctcgtttgagaatggagaaacggcacaactat
gtgagaaaaactgcagaactggccacccagttctttattaatcctgcgaccagtcagccc
aatgttgctgggctgatactggctggttcagctgacttcaagactgaattgagtcagtct
gacatgtttgatcctcgtttacaagccaagattttgaatgttgttgatgtgtcttatgga
ggtgaaaacggttttaatcaagctattgagttgtctgctgaaatcttgtcgaatgtgaag
ttcatacaagaaaagcgattaattggaaaatactttgaggagataagccaggatactgga
aagtatgtgtttggcatagatgatacgttgaaggctctggaaatgggtgctgtagaaacc
cttattgtatgggaaaatctagagatcaataggtacatgctaaagcacagtgtaaccgga
gaaattatcataaaacacctgaataaggagcaggaggctgatcagagcaacttccgtgat
cctgaaacctctgcagagttggaagttcaagaaaaaatgcccctgctcgaatggtttgcc
aacgagtacaagcgcttcggttgctctcttgaattcgtcacaaacaaatcccaagaagga
tcacagttttgcagaggcttcggtggcattggaggtatcctccgctatcagcttgacata
agatcattcgatgagctatctgatggagaagtttacgaggattctgaatga
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