Gossypium hirsutum (upland cotton): 107952793
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Entry
107952793 CDS
T04793
Name
(RefSeq) trafficking protein particle complex subunit 11-like
KO
K20308
trafficking protein particle complex subunit 11
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107952793
Membrane trafficking [BR:
ghi04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
107952793
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Foie-gras_1
TRAPPC13_C
Gryzun-like
Gryzun
Motif
Other DBs
NCBI-GeneID:
107952793
NCBI-ProteinID:
XP_040972462
UniProt:
A0ABM3BZH3
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Position
A07:73678907..73684442
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AA seq
1173 aa
AA seq
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MEEYPEELRSPPVALVALVGCPEQHGAITTHLLSQQHPINTLALPDFSKLSHLLHRPPSP
SSSPAGFLKRDWLVKHRTKIPAVVAALFSWDHVSGDPAQWVQVCSDLDDLKAAIRPRNTK
LLLLVVVGQSDDISEDRLLALRKRAEVDSKYLLLFNPDLSQLNNSLQRLSASFAELETTF
YREEGRRIKARIEKKNFSSPDLQVRYCFKVAVYAEFRRDWAEALRFYEDAYHALREMVAT
STRLPPIQRLFEIKIVAEHLHFKICTLLLHGGKLREAITWFRQHVVSYKSLVGDPNVIFL
HWEWLSRQFLVFAELLDSSSATLPSTSSLPLGTADQPLTEWEFHPAYYYQSAAKYLKEKR
SALELTVSNSETFSENDDGSAESVVPSIYIGQFARLLEQGDDPAMQSITDDEYTRYAIAE
GKRFQDSFEIIALLKKSNEIYSNLKVQRMGSLCAFQIAREYFSLGDFNNAKQQFDGVANL
YRQEGWVTLLWEVLGYLRECSRKQGAVKEFVEFSLEMAALPVSIVDGIQSTKCGPGGPAS
LEQREMIHREIFALISGEARPISINGVDDLKVTGDNTLHLEIDLVSPLRSVLLASVAFHE
QIIKSGVSSLITLSLLSQLPLSIEIDQLEVQFNQSQCNFIIMNAQKHPLEAVQSEQHDHR
MESAPSLALTTNKWLRLTYDIKSEQSGKLECISIIAKMGPHFTICCRAESPASMDDLPLW
KFEDRVETFPTKDPALSFSGQKAAQVEEPDPQVDVTLGASGPALIGERFLLPVTISSRDH
AIYAGEMKINLVDVSGGGLFSPRESEPFSLDTHHVELLGIVGPEGEDESQRASDKIMKIQ
QSFGLVSVPFLSIGESWSCKLEIMWHRPKPIMLFVSLGYSPNSNESNAQKVNIHKTLQIE
GKNAVLISQHFMFPFRRVSLLLSKIKPIPDSNQFSSLPMHESTVLVVCAKNCSEVTLQLL
SMAIEVDDGGTERSCSIQQGDEDLGTAVLLPGEDFKKVFTVIPRLDSSKLRLGMVNLKWK
RHFGIEDRSGLTVTGSEVVTKHELPVVHVELSPVVVTLECPPYAILGEPFMHHVKIRNQT
ELLQEVKFSLADSQSFVLSGSHSDTVFVLPKSEHVLNYKVVPLSSGLQQLPRISLTSVRY
SARFQPSITASNVFVFPSKPHCKMTGITEKRLE
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atggaagagtacccagaagaattgaggagtccaccagtggcgctggtagcattggtagga
tgcccagagcagcatggggcgataaccacccacctcctctcccagcagcatcctatcaac
accttggccttgcccgacttctccaagctctcgcatctcctccatcgccccccctcccct
tcttcttcccccgccggctttttgaaaagggattggctggtcaagcaccgcactaagatc
cccgccgtggtggccgcactcttctcctgggatcatgtctccggtgaccctgcccagtgg
gtccaagtctgctccgatctggatgacctaaaagccgctattcgtcctaggaacaccaaa
ttgttgctgctcgttgtggtgggccaatccgatgacattagtgaagatcgtctgcttgcc
ttacggaagcgagcagaggtcgattccaagtaccttctcctcttcaaccccgatctttct
caactcaataactctcttcaaaggttgagcgccagttttgccgaactagaaactactttt
tacagagaagaaggtcgaaggattaaagctcgcattgaaaagaagaatttctcctctccc
gatctccaagttcgctactgttttaaagttgctgtgtatgcagagttcaggcgagactgg
gctgaagccttgaggttttatgaagatgcctatcatgctctgcgcgagatggttgctacc
tcaacaagattgcctccaatacaacgcttatttgagatcaaaattgttgctgagcacttg
catttcaagatttgcactttgttgttgcatggtggaaagctcagagaagcaattacatgg
ttccgccaacatgttgtctcctacaagagccttgttggagatccaaatgtcatttttctt
cactgggaatggctcagcaggcagtttttggtttttgctgagttgcttgactcaagctct
gccactcttccaagcacttcctctctaccattaggcactgccgaccaacctctgactgaa
tgggaattccatccagcttattactatcagtcagcagctaaatacttgaaggagaagaga
tcagctctggagttgacagtgtcaaattcagaaacttttagcgagaatgatgatgggagt
gctgaatctgtggtaccatcaatttatattggtcagtttgctcggctacttgagcaaggg
gatgatccggctatgcagtccattactgatgatgaatacactcgttatgcaattgccgag
ggaaaaaggtttcaagactcctttgaaattattgctttgctcaaaaagtctaatgaaata
tatagtaatcttaaagttcagaggatgggttctctttgtgcctttcagattgctagagaa
tatttttctttgggtgatttcaacaatgcaaaacagcagtttgatggtgttgcaaatcta
tataggcaagaaggatgggttactttgttgtgggaggttttgggttacttgagagagtgc
tcaaggaaacaaggtgctgtaaaagagtttgtagagttttctcttgaaatggctgcattg
ccagtatctattgtcgatggcatccagtcgaccaaatgtggtccaggaggacctgcaagt
cttgaacagagagaaatgatacacagagaaatttttgcactcataagtggagaagctagg
ccaatatccattaatggagttgatgatctcaaagtaaccggagataatacccttcatctt
gagattgatcttgttagcccacttagatcagttcttcttgcttcagtggcttttcatgaa
cagataatcaagtccggtgtctcctccttgattacattatctcttctatcacagttacca
ctttccattgagattgatcagttggaagtccaatttaatcaatctcaatgcaattttatc
atcatgaacgcccaaaagcatccattagaagcagtgcagagtgagcaacatgatcaccga
atggagagtgccccttctttagcactcactacaaacaaatggctgcggctgacttatgac
atcaaatctgaacaaagtggaaagcttgaatgcatatccattattgcaaaaatgggtccc
cacttcacaatctgctgcagagctgaaagtcctgcttcgatggatgatttgcctctttgg
aagtttgaagaccgtgtggaaactttccctaccaaggatcctgctctatcattctctggt
cagaaggctgcccaggttgaagaacctgacccacaagtggatgtcacacttggtgcttcg
ggccctgcattaattggagagagatttctgctaccagttaccatatcctccagggaccat
gccatatacgctggtgaaatgaagataaatctcgtggatgtgagtggaggtggcctgttt
agtcctagggaatctgagcctttttcattggacactcatcatgttgagcttcttggcatt
gttggaccagaaggagaagatgaatctcaacgggcctctgataaaatcatgaaaattcaa
caatcttttgggttggtttctgttccgtttctaagcattggagaatcatggtcctgcaaa
ctagaaatcatgtggcaccgacccaaaccaattatgctctttgtatcgttgggctactcc
cctaattccaatgagtcgaatgcacaaaaagtcaatattcacaagaccttgcaaattgaa
ggaaagaatgctgttttaattagccaacattttatgtttcccttccgcagggtttccttg
ctgctttcaaagatcaagccgattcctgattctaatcagttttcatcgctacccatgcat
gaatcaactgtacttgttgtttgtgccaagaactgcagtgaggtgacattgcagctgcta
tccatggctattgaagttgacgatggtggcactgaaaggtcatgttccatccaacaagga
gatgaagatcttggcactgcagttcttttgccaggagaagatttcaagaaagttttcact
gttattcctcggttggattcatcaaagcttagattggggatggtgaatctaaaatggaag
aggcattttggaattgaagatagatctggtttgactgtgactggttctgaggttgtaact
aagcatgaacttcctgttgtacatgtagagctgtcaccggttgtcgtgactttggaatgt
cctccttatgccatcctaggagaacccttcatgcaccatgttaaaatccgtaaccaaact
gagttacttcaagaggttaagttttcattggcagattcacagagttttgtgttatctggg
tctcacagtgacacagtgtttgttcttccaaaatccgagcatgtgcttaattacaaagtg
gtgcctctttcctcgggtttgcaacagttgcctagaatctctttgacctctgtgagatac
tcggctcgatttcagccctccattactgcatctaatgtttttgttttcccttccaagcct
cattgcaagatgactggtataacagaaaaaaggctggagtag
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integrated database retrieval system
