Gossypium hirsutum (upland cotton): 107952806
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Entry
107952806 CDS
T04793
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107952806
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107952806
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
107952806
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
HAT_Syf1_M
Motif
Other DBs
NCBI-GeneID:
107952806
NCBI-ProteinID:
XP_016743477
UniProt:
A0A1U8NWY7
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All DBs
Position
A07:complement(64631612..64636677)
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AA seq
494 aa
AA seq
DB search
MSENGKLFIGGISWDTNEQRLKEYFDSYGEVVEAVIMKDRTTGRARGFGFVVFADPAVSD
RVIKEKHNIDGRMVEAKKAVPRDEQNIMSRSTSSIHGSLGPGRARKIFVGGLASTVTESD
FKKYFDQFGNITDVVVMYDHNTQRPRGFGFISYDSEEAVDQVLLKKFHELNGKMVEVKRA
VPKELSLVSSRSSLGGFNNGMNSVNSFLNGYAQGFTPTNVGGYGLGMDGRFSPIASGRSG
FPPFGSGYGMGMNFEPGLNPNFGNSANFSSNMSYGRGVSPYYIGNTNRFGSPIGYDGRSG
GNTSFFRSMTRNLLGNGGINYNTNVVSSSACMGSGSGSIAGSVFGNRINWGSSGSPSHGG
GTDVFSNSLNFGYASGYNRFGLETAGYGRNNGTNLVATSSYAASNGGYDGAFVDLYSGAS
VYGDTSWRSSMFERDGFHSFGYGLGSATSDVLGKSSPTYVGGYSVSKRQENRGKTCHLAS
YDHSLNDFRLENLP
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaaaatggtaaactatttatcggtgggatatcttgggacaccaatgaacagcgt
ctcaaagagtatttcgatagttatggtgaagtggtagaggcagtgatcatgaaggatcgg
accacagggcgtgctcgtggttttggtttcgttgttttcgccgacccagctgtttctgat
agagtcatcaaggagaaacacaacattgatggcaggatggttgaggcaaagaaggcagtt
cctagggatgagcaaaacattatgagtagaagcactagcagcatccatggttctctaggt
ccaggccgggcaagaaagatttttgttggaggtttagcatctacagtcacagagagtgac
tttaaaaagtattttgatcagtttggaaatataacagatgtagtggtgatgtatgatcat
aacacccaaaggcctaggggttttggattcatttcttatgattcagaagaagcagtggac
caagtgttgctaaaaaaattccatgaactgaacggtaaaatggttgaggtcaaaagagca
gttcccaaagaattatcacttgtttctagtcgtagttcccttggtggatttaacaatggt
atgaatagtgtcaacagctttcttaatggctatgctcaaggatttactccaaccaatgtt
ggaggttatggacttgggatggatggtagattcagtccaattgctagtggtcgaagcggg
tttcctccttttggttctggttatggaatgggcatgaactttgagccagggttgaaccca
aattttggaaatagtgcaaattttagtagtaatatgagctatggacgaggagtaagccct
tactatattggaaatacaaatagattcggtagtcctattgggtatgatggaagaagtgga
ggtaatacttcctttttcagatcaatgacccgtaatcttttaggaaatggggggatcaat
tataacacaaatgttgttagttcaagtgcatgtatgggatctggaagcgggagtatagca
ggaagtgtctttgggaacaggattaattggggttcttctggaagtcccagtcatggtgga
gggactgatgtttttagcaatagtctgaatttcggctatgcaagtggttataatagattt
ggactggaaacagcagggtatggaagaaataatgggaccaatctagtggcaacatcatca
tatgcagcatcaaatggtggctatgatggagcctttgtggatctgtatagtggtgcttca
gtttatggggatacttcttggagatcatcaatgtttgagcgagatggttttcattcattt
gggtatggactaggtagtgccacttctgacgttttgggcaaaagttctcctacttatgtc
ggaggttatagcgttagtaagagacaagaaaatagaggtaagacttgtcacttagcatcc
tatgatcattctttaaacgattttagattggagaatttgccataa
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