Gossypium hirsutum (upland cotton): 107952822
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Entry
107952822 CDS
T04793
Name
(RefSeq) rhamnogalacturonan I rhamnosyltransferase 1
KO
K23280
rhamnogalacturonan I rhamnosyltransferase [EC:
2.4.1.351
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ghi01003
]
107952822
Enzymes [BR:
ghi01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.351 rhamnogalacturonan I rhamnosyltransferase
107952822
Glycosyltransferases [BR:
ghi01003
]
Polysaccharide
Structural polysaccharide
107952822
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
O-FucT
Motif
Other DBs
NCBI-GeneID:
107952822
NCBI-ProteinID:
XP_040972863
LinkDB
All DBs
Position
A07:complement(82251679..82255211)
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AA seq
512 aa
AA seq
DB search
MCRVEETSGKCDYRKQWEMKIKMFGEGKVEKLKNSMVSRSRMKLWMIRALTTILIWTCFA
HLMTLGEIFGPKLPKGWPSCFTHSTSELPLVAPELSSIPPKLILPPKRLYKNNGYLMVSC
NGGLNQMRAAICDMVAIARYLNVTLIVPELDKTSFWNDPSEFKDIFDVDHFITSLRDEVR
ILKELPPRVQHRVDQGMFLSMQPISWSDISYYAHQILPLVQKHKVVRLNKTDARLANNNL
PPEIQKLRCRVNFNALKFTSQIEELGRRVVKILREKGPFLVLHLRYEMDMLAFSGCTHGC
NSDEEEELTRMRYAYPWWKEKVINSEMKRKEGLCPLTPEETALVLRALGIDRNVQIYIAA
GEIYGGERRMAPLAEAFPNLVRKETLLVRSDLKFFQNHSSQMAALDYLVSLESDIFVPTY
DGNMAKVVEGHRRFLGFKKTILLDRKLLVKLIDEYQSGSLSWDEFSETVKEVHSDRMGNP
KKRVVIPDRPKEEDYFYSNPHECVQLLDEPLS
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgtgcagagtagaggagacaagtggaaagtgtgattacaggaaacagtgggaaatgaaa
attaagatgtttggggaagggaaagtggagaagttaaagaattcaatggtttcaaggtct
agaatgaagctatggatgataagggcattaaccacaattttgatatggacatgctttgct
catttgatgacattaggcgaaatttttggtcccaagttgcccaaaggctggccttcttgt
ttcactcattctacttctgagttgcctttggttgctcctgaattgtcttctataccacca
aaactcattcttccaccaaaaaggttatataagaataatggttatcttatggtttcctgc
aatggaggactcaaccaaatgcgagctgcaatttgcgacatggttgccattgccagatat
ctaaatgtcacacttattgttcctgaactagataaaacctctttctggaatgaccctagt
gagtttaaggacattttcgatgttgatcacttcattacttccttgagagatgaggttcgg
atattgaaggaactaccaccccgagttcagcatcgagttgaccaaggaatgttcctctct
atgcaaccgattagttggtctgatatttcttattatgctcatcagattcttcctcttgtg
caaaagcacaaagttgtacggttgaataaaaccgatgctcggcttgcaaataataaccta
ccccctgagattcagaagttgcgctgccgtgtaaatttcaatgcacttaaatttacttct
caaatcgaggaattgggtagaagggttgtcaagattttgagggagaaaggcccttttctc
gtgcttcatctccgatatgaaatggacatgttggctttttccggctgcactcatggttgc
aacagcgatgaagaggaagaacttacaaggatgaggtatgcttatccctggtggaaggaa
aaagtaataaattcagaaatgaaaaggaaagaaggtttgtgccctttgacacccgaagaa
actgctctagtattaagagcgctcggtattgaccgcaatgttcaaatttacattgccgct
ggagaaatatatggtggcgagagacggatggctccgttggcagaagcatttcctaatttg
gtcagaaaggagactctgctagttcgatcggacttgaaattctttcaaaaccattcatcc
caaatggcagcgttggattatctagtttccttagaaagtgatatattcgttcctacatat
gacggaaacatggccaaggttgtcgaaggccatcggagattcttggggttcaagaaaaca
atcttattagaccgaaaacttctggttaagttaatagatgaataccagagcgggtcgtta
agctgggacgagttctcagaaaccgtgaaggaagtacattcggatagaatgggaaacccg
aagaaacgggtggtcattccggatagaccaaaagaagaagattatttttattctaatcca
catgaatgtgtacaactgttggatgaacctttgagttga
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