Gossypium hirsutum (upland cotton): 107952835
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Entry
107952835 CDS
T04793
Name
(RefSeq) U-box domain-containing protein 15
KO
K08332
vacuolar protein 8
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107952835
03029 Mitochondrial biogenesis [BR:
ghi03029
]
107952835
Membrane trafficking [BR:
ghi04131
]
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Other Cvt associated proteins
107952835
Other autophagy associated proteins
Micronucleophagy
107952835
Mitochondrial biogenesis [BR:
ghi03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
107952835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
ZER1-like_2nd
Insc_C
Arm_2
Cytochrom_C_2
Motif
Other DBs
NCBI-GeneID:
107952835
NCBI-ProteinID:
XP_016743519
UniProt:
A0A1U8NZY4
LinkDB
All DBs
Position
A07:53791056..53793441
Genome browser
AA seq
387 aa
AA seq
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MGHDQEEEETPPSTPTTTASAARKDQEEETWNHQKQTLILELSEKLITGDLQAKIEAARD
IRKVVRKSSVKTRSKFAAAGVIQPLVFMLLSPNLDAREASLLALLNLAVRNERNKVNIVT
AGAVPPLVELLKLQNSGLREVATAAILTLSAAAPNKPTIAASGAAPLLVQILSLGSVQGR
VDAVTALHNLSTCKENSTPILNAKAVSPLINLLKECKKYSKFAEKATALLEILSKSEEGR
VAICDSDGGILTLVETVEDGSLISTQHAVGALLSLCQSCREKYRELILKEGAIPGLLRLT
VEGTSIAQERARTLLDLLRDSPQEKKLASSVLEKIVYDIATRVDGADKAAETAKRLLEDM
VQRSMELSMNRIQHRAASCTPAKVPSA
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgggtcatgaccaggaggaggaggagacaccaccgtcaaccccaacgaccaccgcaagt
gccgccagaaaagaccaagaagaggagacttggaaccaccagaaacaaacccttattctg
gaactctctgagaagctcataactggagatcttcaggccaagattgaagctgctagagat
ataagaaaagttgttaggaaatcatctgttaagacacgttcaaagtttgctgctgccggt
gttattcagcctctagtttttatgctcttgtctcctaatcttgatgcacgtgaagcctcc
cttcttgctctccttaaccttgctgttagaaatgaaagaaacaaggtcaatatcgtgaca
gcaggggccgtccctcctcttgttgagcttctcaaattgcaaaacagtggtttgagagag
gtagccacagcagcaatattaacactctctgctgctgcacctaacaagccaacgattgcg
gcctctggagctgcaccccttctggttcaaatccttagcttgggcagtgttcaaggaaga
gtcgatgctgtcactgccttacacaatctatctacctgcaaagagaactcgacacctatt
ctcaatgccaaagccgtttccccacttatcaacctcctgaaagaatgcaagaaatattcc
aagtttgctgaaaaagcaactgccctgcttgaaatcctttctaagtccgaagaagggcga
gttgcgatctgtgattcagatggtgggattttaaccctggtggagactgtcgaagatggc
tctcttatcagcacgcagcatgctgttggagctttgctttctttgtgccagagctgccga
gaaaaatatcgggaactcattcttaaagaaggtgcaatcccagggcttttacgactgaca
gtagaaggcacaagcatagctcaagaaagagctcggactctcttggatttgctcagagat
tcacctcaggaaaagaaattggcttcctcagttctggagaaaatcgtgtatgatattgct
acccgtgtcgatggagctgataaagcagctgaaactgccaagagattactggaagatatg
gttcaaagaagcatggaactcagcatgaaccgcatccaacatagggctgcatcttgtaca
cctgccaaagttccatctgcatga
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