KEGG   Gossypium hirsutum (upland cotton): 107953045
Entry
107953045         CDS       T04793                                 
Name
(RefSeq) protein mago nashi homolog
  KO
K12877  protein mago nashi
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03013  Nucleocytoplasmic transport
ghi03015  mRNA surveillance pathway
ghi03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107953045
  09122 Translation
   03013 Nucleocytoplasmic transport
    107953045
   03015 mRNA surveillance pathway
    107953045
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ghi03019]
    107953045
   03041 Spliceosome [BR:ghi03041]
    107953045
Messenger RNA biogenesis [BR:ghi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     107953045
Spliceosome [BR:ghi03041]
 Complex C
  Other components
   EJC/TREX
    107953045
SSDB
Motif
Pfam: Mago_nashi
Other DBs
NCBI-GeneID: 107953045
NCBI-ProteinID: XP_040931753
LinkDB
Position
A08:complement(8986735..8988856)
AA seq 151 aa
MAAEEESGEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFLTPA
VLKECRRIITESEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSKD
PEGLRIFYYLVQDLKCFVFSLISLHFKIKPI
NT seq 456 nt   +upstreamnt  +downstreamnt
atggcggccgaggaggagagcggagagttttacctccgttactacgtagggcataaaggg
aaatttgggcacgaatttttggagttcgagttcaggccggacgggaagctacgatatgct
aacaactccaactacaaaaacgacaccatgatccgcaaagaagtcttcctcacccctgcc
gttctcaaggaatgccgccgcatcatcaccgagagcgagatcatgaaggaagatgacaac
aactggccagaacctgaccgtgtcggacggcaggagctcgagattgtgatggggaatgag
catatttctttcactacttcaaagattgggtcccttgttgatgttcagagcagcaaggat
cccgaagggcttcgtatattttattatctggttcaggacttgaagtgctttgtgttctct
cttatctcgctccacttcaagatcaagcctatttga

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