Gossypium hirsutum (upland cotton): 107953100
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Entry
107953100 CDS
T04793
Name
(RefSeq) pumilio homolog 2
KO
K17943
pumilio RNA-binding family
Organism
ghi
Gossypium hirsutum (upland cotton)
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Gene cluster
GFIT
Motif
Pfam:
NABP
PUF
PUF_NOP9
Motif
Other DBs
NCBI-GeneID:
107953100
NCBI-ProteinID:
XP_016743813
UniProt:
A0A1U8P0E8
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Position
A08:409342..415679
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AA seq
1067 aa
AA seq
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MMLSELDRRPMIGSSEGSFGDDLEKEIGLLLREQHSRQDADDLERELNLYRSGSAPPTVE
GSLSAVGGLFGGATSSAATGGGFAATAFSAFAGAKNGNGFASEEELRSDPAYHSYYYSNV
NLNPRLPPPLLSKEDWKFAQRLKGEGLAIGGIGDRRKLNRADNGSNRSLFSMPPGFDTRK
QENEVEAEKVHSSADWGGDGLIGLSGIGLGSKQKSFAEIFQDDLGHTAPVARIPSRPASR
NAFDENFENVGSAESELAHLRRQLTSADPLRSSGSGQGSSAVHNIGPPSSYTYAAAVGAS
MSRSTTPDPQLVARASSPCLTPIGGGRVGNSEKRNINSPSTFSGVTSGVNGSDDLVAALS
GMNLSSNHGIDEDNQLASQIEQDVENHQNYLFGLQDGQDHIKQQACLKKPESGHLHMPSV
KSNGIRSDLKSPSLLSDRQAVLQKSAVPSNNSYLKGSPASTLNGSGSLPAQYPHGDGANA
SFPNYGLSGYSLNPALANMVPSQLGSGNLPLLFENVAAASAMAVPGMDSRVLGGAFGSGQ
NISNAASESHNLGRVGSQIAGNALNAPFIDPLYLQYLRTSDYAAAQQAALNDPTVDRNFL
GNSYMNLLELQKAYLGALLSPQKSQYGVPLGAKSTSSNLHGFYGNTTFGAGMSYSGSPLA
NAVLPNSPVGPGSPIRHTDLNMRFPSGMRNLAGSVIGPWHLDSGCNIDESFSSSLLEEFK
GNKTKCFELSEIAGHVVEFSADQYGSRFIQQKLETATTEEKTMVYEEIIPQALALMTDVF
GNYVIQKFFEHGLPSQRRELAGKLFGHVLTLGLQMYGCRVIQKAIEVVDLDQKIKMVQEL
DGSVMRCVRDQNGNHVIQKCIECVPEENIQFIVTTFFDQVVTLSAHPYGCRVIQRILEHC
KDPKTQSKVMDEILGSVSMLAQDQYGNYVVQHVLEHGKPHERSIIIKELAGKIVQMSQQK
FASNVVEKCLTFGGPSERQLLVNEMLGSTDENEPLQAMMKDQFANYVVQKVLETCDDQQR
ELILSRIKVHLNALKKYTYGKHIVARVEKLVAAGERRIAAQSPHPTA
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atgatgttatctgagttagataggagaccaatgataggaagtagtgaaggatcattcggg
gatgatttagagaaagagataggattattgctccgtgaacagcatagtaggcaagatgct
gatgatcttgaacgcgagctgaacttgtatagaagtggctctgctcctcctaccgtggag
ggttcactgagtgcggttggcggtttgtttgggggtgccacctcctccgctgctactggt
ggtggttttgctgccaccgccttttcagcttttgctggagctaaaaatggaaatggattt
gcatctgaggaagaactcaggtctgatccagcttatcattcatactattactcgaatgtg
aatctcaacccgaggctcccacctcctttgctttcaaaggaggattggaagtttgcacag
aggttgaagggagagggtttagctataggtgggattggagataggaggaagttgaatagg
gctgataatggtagcaataggtcgttgttctcgatgccgcctgggtttgataccaggaaa
caagagaacgaagtagaggcagagaaagtgcatagctctgcagactggggtggtgatgga
ctgattggtttgtctggtataggacttggaagcaaacagaaaagctttgccgaaattttt
caggatgatttgggacacactgctccagtcgctaggataccatctcgtcctgcgagtcgt
aatgcttttgatgagaactttgagaatgtaggttctgctgaatctgagctcgctcatttg
cggcgacaacttacttctgcagatcctttaaggtcaagtggaagtggtcagggatcgtct
gctgtccataacatcgggccaccttcttcatacacctatgcagctgctgtaggtgcttca
atgtctaggagtaccactcctgatccccaactcgtagctagggcttctagtccttgcctg
acaccaattggtggaggcagagttggcaactcagagaaaagaaacataaatagtccaagc
acatttagtggcgtcacatctggtgtcaacggatctgatgatcttgttgctgctttatca
ggcatgaacttgtcatcaaatcatgggatagatgaagataatcagttagcatcacaaatt
gaacaagatgttgagaatcaccagaattatctgtttggtttgcaagatggtcaggatcat
atcaaacagcaggcatgcttgaagaaaccagaatctggccatttacatatgccttcagtt
aagagtaatgggattagatcggacctgaaaagcccttccttgctttctgataggcaagct
gtgctccagaaatctgctgttccctcaaacaattcttacttgaaaggatcacctgcttcc
acacttaatggcagtggcagcttacctgctcaatatccgcatggtgatggtgccaatgca
tcatttccaaactatgggttaagtggttactctttaaatcctgctttggccaatatggtg
cccagccaacttggatctgggaatttgccactactgtttgaaaatgttgctgctgcatca
gctatggcagtccctggaatggactccagagtgcttgggggagcttttggttctggacag
aacatttcaaatgctgcatctgagtcccataatcttggtagagttggaagccaaatagct
ggaaatgctctgaatgcacctttcattgatcctttgtatcttcagtatttaaggacttct
gattatgctgcagcacagcaggcagctcttaatgaccccactgtggatagaaatttcctt
ggtaattcatacatgaacttgcttgagcttcaaaaagcttatctcggagctctgctatca
cctcaaaaatcccaatatggtgttccattgggtgctaaatctactagttcaaatctccat
ggcttttatggaaataccacctttggagctggcatgtcttattctggaagtcccttagca
aatgctgttcttccaaattctccagttggacccggtagtcctatcagacacactgacctg
aatatgcgttttccatctgggatgaggaatctagctgggagtgtaattggaccgtggcat
ttggattcaggatgtaatattgatgaaagcttttcctcctccctacttgaagagtttaag
ggcaataagacgaagtgttttgaactttcagaaattgctggtcatgttgttgagttcagt
gcagatcagtatggcagcaggtttattcagcaaaaacttgaaacagccacaactgaagag
aaaactatggtttatgaggaaatcattcctcaagctcttgctttgatgactgatgttttt
ggtaattatgttattcaaaagttttttgaacacggacttccaagtcagagaagggaactt
gctggcaagctttttggtcatgtattaactcttggtctgcaaatgtatggatgtcgggtg
atccagaaggccatagaagttgtcgatctggatcagaagattaaaatggttcaagagctt
gatggtagtgtgatgcgttgtgtacgtgatcagaatggcaaccatgttatccaaaaatgc
atcgaatgtgttcctgaggagaacatacaatttatagttacaacattttttgatcaagtt
gtgaccctttctgctcatccatatgggtgccgagtgatacagagaatattggagcactgc
aaggacccaaaaacacagagcaaggttatggacgagattctaggatctgttagcatgttg
gcccaagaccagtatggcaattacgttgttcagcatgtactggagcatggaaagcctcat
gagcgctcaattataattaaggagttagctggaaagattgtccagatgagtcaacagaag
tttgcctctaatgttgttgagaagtgcttaacttttggcggtccttctgaacgtcagtta
ttggtgaatgaaatgcttggttctactgatgagaatgaacctcttcaggcaatgatgaaa
gatcagtttgcaaattatgttgtacagaaagtactggagacttgtgatgaccagcagcgt
gagctgatcctttctcgaattaaggtccatttaaatgcattgaagaagtacacttacgga
aaacatattgttgcacgtgtagagaaacttgttgctgctggggaaaggagaattgctgct
caatctccacaccctactgcttag
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integrated database retrieval system