Gossypium hirsutum (upland cotton): 107953140
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Entry
107953140 CDS
T04793
Name
(RefSeq) putative axial regulator YABBY 2 isoform X5
KO
K25796
plant-specific transcription factor YABBY family protein
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ghi03000
]
107953140
Transcription factors [BR:
ghi03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Yabby
107953140
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YABBY
YABBY_N
HMG_box_2
HMG_box
Ccdc124
Zn_ribbon_Com
Zn_ribbon_FGT1_1
Zn_ribbon_12
Zn_ribbon_Elf1
Motif
Other DBs
NCBI-GeneID:
107953140
NCBI-ProteinID:
XP_016743863
UniProt:
A0A1U8P0K1
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All DBs
Position
A07:21917058..21922981
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AA seq
183 aa
AA seq
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MSMGLTSERVWYVHCNFCNTILAVSVPCNSAFNIVTVRCGHCANLLSVNMGTSLQTVPSQ
DAQKQQITIDEDHSNKECGSSSKCNKFSAVDSTEQEATRMPPIRPPEKRQRVPSAYNRFI
KEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGLKLEGSKQAKLDQGYADQGSQKSN
GYC
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatgggcttgacatctgaacgtgtttggtatgttcactgcaacttctgcaacacc
attttagcggttagtgttccatgcaacagtgcgttcaacatcgtgactgttagatgtggg
cattgtgctaatctgctgtctgtaaatatgggaacttcacttcaaacagttcccagtcaa
gatgctcagaaacagcagataaccattgatgaagatcattcaaataaggaatgtggatcc
tcttccaaatgcaacaagttttctgcagttgattctacagagcaagaagcaactagaatg
ccacctattcgcccccctgagaagagacaacgtgttccttctgcatataacaggttcatt
aaggaggaaatccaaaggatcaaagctagtaatccagacatcagtcacagggaagctttc
agcacagcagcaaaaaattgggcacattttcctcacattcactttgggctaaagctggag
ggaagcaagcaagcaaaacttgaccagggatatgcagatcagggttctcaaaagtctaat
gggtactgctga
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integrated database retrieval system
