KEGG   Gossypium hirsutum (upland cotton): 107953196
Entry
107953196         CDS       T04793                                 
Name
(RefSeq) protein SLOW WALKER 1 isoform X2
  KO
K14549  U3 small nucleolar RNA-associated protein 15
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    107953196
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ghi03009]
    107953196
Ribosome biogenesis [BR:ghi03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    107953196
SSDB
Motif
Pfam: UTP15_C WD40_Prp19 WD40 WD40_CDC20-Fz WDR55 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_TEP1_2nd NBCH_WD40 Beta-prop_EIPR1 Beta-prop_EML EIF3I Beta-prop_SCAP Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st Beta-prop_TEP1_C WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_IFT122_1st ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 WD_LRWD1 Beta-prop_DCAF4
Other DBs
NCBI-GeneID: 107953196
NCBI-ProteinID: XP_016743924
UniProt: A0A1U8P139
LinkDB
Position
D08:complement(5554828..5557456)
AA seq 540 aa
MAEIRAEEPASTISKTFLIKPKLKSKPRSLPQTPESKYWSSFKSTKIPNLVSSISSLSFS
PSPPHLFAAAYSASVSLFSPLSLSDGDVSPSSTISSFSDVVSSISFRNDGLLLAASDLSG
LVQVFDVKTRTPLRRLRSHTRPVRFVKYPVLDKLHLLSGGDDAVVKFWDVAGESVVLDLM
GHKDYVRCSDCSPVSPDLFVTGSYDHTVKVWDVRVENSRSVLEVNHGKPVEDVIYLPSGG
LIATAGGNSVKIWDLIGGGRMVYSMESHNKTVTSICVGRVRKENDGAESMEDRILSVGLD
GYMKVFDFGNMKVTHSMRFPAPLMSVSFSPDCRTRVIGTSNGIIFAGRRKGKENVESGRV
GNVLGFESISESERRVLKPTYFRYFHRGQSEKPTEGDYLVMRNKKIKLAEHDKLLKKFRH
KDALVSVLSRKNRENVVAVMEELVARKKLLKCVSNLDSDELGLLLTFLSKNATMPRYSSL
LMGLTKKVIEMRVEDIRNSDALKGHIRNLKRSIEEELRIQHSLQEIQGIISPLLRIAGRR
NT seq 1623 nt   +upstreamnt  +downstreamnt
atggcagaaatcagagcagaagaaccagcatcaacgatctcgaagaccttcttaatcaaa
cccaagctaaaatccaagccaagaagcctaccccaaaccccagaatccaaatactggtct
tctttcaaatccactaaaatccccaacctcgtctcttccatctcttccctttccttttcc
ccttcgccaccccaccttttcgccgccgcctactccgcttccgtttccctcttctccccg
ctctccctctccgacggcgatgtttcaccttcctccacaatctcctcattctccgacgtc
gtttcttctatttccttccgtaacgacggtctcctcttagccgcttccgatctctccggt
ctcgtccaggtcttcgatgtcaaaacccggaccccgcttcgtcgcctccggtctcatacc
cgtccggttcggttcgttaaatacccggttctcgacaagctccatttgctatctggtggt
gacgatgcggtcgttaagttttgggatgttgctggggagagcgtggtattggacttgatg
ggtcataaggattacgtacggtgcagtgattgtagtccggtaagtcctgatttgtttgtt
actggttcttatgatcatactgttaaggtttgggatgttagggtagaaaattcgaggtcg
gttttggaagtgaatcatgggaaaccagtggaagatgtgatttatttgccttctggtgga
ttgatcgcaactgctggtgggaattcagtgaagatatgggatttgattgggggagggaga
atggtttattcaatggaaagtcataataaaactgttacatcgatttgtgtaggaagggtt
aggaaggaaaatgatggggctgaatcaatggaggataggattctgagtgttggtttagat
ggttacatgaaggtttttgattttggtaatatgaaggttactcattcgatgcggttccct
gctcctcttatgtcagttagcttttcgccagattgtcgaactagagtgatcggaacatcg
aacgggattatatttgccgggagaaggaaaggaaaggagaatgtggagagtggtagagtg
gggaacgttttgggttttgagagtatatcggaatcggaaagacgggtattgaagcctacg
tattttaggtactttcatagagggcagagtgagaagccaactgaaggggattatttagtg
atgagaaataagaagatcaagttggctgagcacgataagttactgaagaagtttaggcat
aaggatgcactagtttccgttttaagtaggaagaaccgggagaatgtggttgccgtgatg
gaggaattggtggcaaggaagaagttactgaaatgcgtatcgaatttggattcagacgag
cttggtttattgttaacgtttttgagtaagaatgccacaatgccaaggtattctagtttg
ttgatggggttgacgaaaaaggtgattgagatgagggttgaagatatccgaaattcggac
gcattgaagggtcatattagaaaccttaagcggtcgatcgaggaagagctaaggatacag
cattcattgcaggaaatacagggtataatctctcctttattaaggattgctggtagaaga
taa

DBGET integrated database retrieval system