Gossypium hirsutum (upland cotton): 107953202
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Entry
107953202 CDS
T04793
Name
(RefSeq) U1 small nuclear ribonucleoprotein C
KO
K11095
U1 small nuclear ribonucleoprotein C
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107953202
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ghi03041
]
107953202
Spliceosome [BR:
ghi03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
107953202
Complex B
107953202
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-U1
CLIP1_ZNF
Motif
Other DBs
NCBI-GeneID:
107953202
NCBI-ProteinID:
XP_016743928
UniProt:
A0A1U8P0R0
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Position
D08:complement(5452490..5454466)
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AA seq
191 aa
AA seq
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MPRYYCDYCDTYLTHDSPSVRKQHNAGYKHKANVRTYYQQFEEQQTQSLIDQRIKEHLGQ
AAAFQQVGAAFNQHLMAQRPRLPVMAIPGAPLPVNQPMVPGMRPPVLPRPIPGAPGYIPV
PGMPPMMAPPGAPLPGQVNGLPRPPTLAPPTTVSGTVTTPTSSNGAPNPTAPTSGGFDNF
NANAQPSEANQ
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgcctcggtattactgtgattattgcgatacttatttgacccatgactctccatcagtt
agaaagcaacacaatgcaggttacaagcacaaggcgaatgttagaacttactatcagcaa
tttgaggagcaacagacccagagcttaatagaccaaaggatcaaggaacatcttggtcaa
gctgcggctttccagcaggttggagctgctttcaatcaacatttaatggctcagaggcct
cgacttcctgttatggcgattcccggggctccattacctgtaaaccaaccaatggtccca
gggatgaggccccctgttctgccaagaccaattccaggtgccccaggttatattcccgtt
ccaggcatgccaccaatgatggcaccacctggtgctcctttgcctggacaagtaaatggc
cttccacgacctcctacattggctcccccaacaacagtttctggaactgtaacgacaccc
acttcttctaatggagcacccaatcctactgccccaacaagtggcgggtttgacaatttc
aatgccaacgcacaaccttctgaagctaatcagtaa
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