Gossypium hirsutum (upland cotton): 107953416
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Entry
107953416 CDS
T04793
Name
(RefSeq) uncharacterized protein LOC107953416 isoform X1
KO
K17925
sorting nexin-13
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ghi04990
]
107953416
Domain-containing proteins not elsewhere classified [BR:
ghi04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
107953416
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
IF2_assoc
Motif
Other DBs
NCBI-GeneID:
107953416
NCBI-ProteinID:
XP_016744210
UniProt:
A0A1U8NZA0
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Position
D12:3489503..3496983
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AA seq
1041 aa
AA seq
DB search
MKPMETIQDLIDEAKVRTLWLAMVIFIVTYFLSHTSTSMWMNLPIAVIIVSTFRVIANEV
EFKWKVKSVHPRTYLSHLERKQLSVNDSRLSSSPPPPKWKQKIDSPIVEAALNEFIDKIL
RDFVINLWYSEITQDREAPELIRALILDAIAEITERVKEINLVDLLTRDIVDLIGDHLDL
FRRNQAAIGVDVMATLSSEERDKRLKHHLMVSGELHPALLSSESEYKVIQQLFGGVLAVV
LRPREAQCPLVRTIAREIVTCLVVLPLLNLASPRYINEVIEYVLLAIKEDLNKIVAGFDQ
SSVGVRDDGSMTCKTPSLNSQETDLNLARIDNQKETYPVCNRYEEEPVHHKPADWARKLE
AATQRRTEVLAPENLENMWTKGRNYKKKESKYVKTGYQESIPKGSETKSGVLMGNSVNDF
SRNKTRTSMGSEEKTMTQLEHGSSLDTQSCDDNMIDTKLAKSSSFEGDRHVNTFKNVSEK
AADGNKIRLKRSSSTSDLKVGTDTKKALSVDVEGPIISECYGPDFDRHSEEYGGKIASNI
VLRNEGPHIPKLRCRVIGAYFEKLASKSFAVYSISVTDAENRTWFVNRRYRNFERLHRHL
KEIPNYSLHLPPKRIFSSSTEDAFVHQRCIHLDKYLQDLLSIPNVAEQHEVWDFLSVSSK
NYSFGKSSSVMKTLAVSVDDAVDDIVRQFRGVSDGLMRKVVGSSSPPSEASSSATGRTLS
WNADEIAKDISKHYNLDTVHSASDNEDGNKDGDHGYVDDGSYSQGLDMHLDNELNSKNLP
PLVIERGRESVNLIYEKHNLGVKTEPFGQGGSPKVKISATSSHLEDPVGMPPEWTPPNVS
VPLLNLVDKVFQLKRRGWLRRQVFWISKQILQLVMEDAIDDWLLRQIYWLRKEETITLGI
RWIQDLLWPGGKFFRAIGDIHSKFDNSNLNQTPIPLLSFSQFGGSNASKPGSFEQQLEAT
RRASDIKKMLFDGPPATLVGLIGYKQYRRCARDIYYFTQSAICIKQLAYAILERLLISVF
PELRDLVMDLHAKNISTLHRK
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgaagccaatggagacaatacaggatctgatcgacgaagccaaagtacgtacactttgg
ttggccatggttatctttatcgtcacttatttcttgtctcatacaagtacgtcaatgtgg
atgaatttacctatagcagttattattgtttccacattcagagttatagctaatgaggtt
gagttcaaatggaaagttaaatcagttcatccccgaacctatttatctcatttggagagg
aaacagttgtctgtgaatgattcccgcctttctagctcaccgcctccacccaagtggaag
cagaagattgattctcctatagttgaggctgctctcaatgaatttattgataaaatactt
agggattttgtcattaatttgtggtattcggagataactcaagatagagaagcccctgag
ttgatacgtgcattgattttggatgctattgctgaaataactgaaagggtgaaagagata
aaccttgttgatttgcttacaagggatatagttgatttgataggagatcacttggatctt
tttagaagaaaccaagctgcaataggtgttgatgttatggcaacattatcatccgaggag
agggataaaagattgaaacaccaccttatggtttctggagagcttcatcctgcattgctt
tcatcagagagtgagtacaaggttattcagcagctttttggcggagttttagcagtagta
ttgagacctcgagaagctcaatgtcctttggttcgaactattgctcgtgagattgtaact
tgcttggtagtgctacctcttttgaatttggcaagccctcggtatatcaatgaagtgatt
gaatatgttctacttgccattaaagaagatttgaataagatcgtggcaggttttgatcag
tcttcagtgggagtacgtgatgatggttctatgacatgcaaaacaccgtccttgaatagt
caagaaactgatttaaatttggctagaattgacaatcagaaagaaacatatccagtttgt
aacagatatgaggaagaaccagtgcaccataaaccagctgattgggctcgaaaattagag
gcagcaactcagagaagaactgaagttcttgctcctgaaaatcttgaaaacatgtggaca
aaaggaagaaactacaaaaagaaggagagcaaatatgtaaaaacaggatatcaagaatct
attcctaaaggttctgagacaaagagtggtgtactgatggggaattcagtaaatgatttc
tctagaaacaagaccagaacttctatgggaagcgaagagaaaactatgacgcaactagag
catggctcgagtcttgacacccagtcatgtgatgataacatgatagacacaaagttagct
aagtcatcatcatttgaaggagatcgtcatgttaatacatttaaaaatgttagtgagaaa
gctgctgatggaaataaaattaggcttaagagatccagtagtacctctgatttgaaagtt
ggaactgatacaaagaaggcacttagtgtagatgttgaagggcctattatttcagaatgc
tatggccctgattttgacaggcatagtgaagaatatgggggtaagattgcctcaaatata
gtacttcgcaatgaggggccacatattcccaagcttaggtgtcgggttattggagcatac
tttgagaaacttgcatcaaaatcatttgcagtttattcaatttctgtgactgatgcggaa
aacagaacttggtttgtcaatagaagatacagaaattttgaacggttgcatcgacatctg
aaagaaattcccaattattcattacatttgccccccaaaaggatattttcatcaagcaca
gaggatgcttttgttcatcagcggtgcattcatcttgacaaatatctgcaagatctgttg
tctatacccaatgtggctgaacagcatgaagtgtgggattttttaagtgtttcctcaaag
aattactctttcggaaaatcctcatcagtgatgaaaacccttgcagtcagtgtggatgat
gctgtagatgatattgtacgccaatttaggggagtatcagatggcttaatgcgcaaagta
gttggttcatcctctccccctagtgaagcctcttcttcagccaccggcaggacgctgtca
tggaatgcagatgagattgctaaagacatttcaaagcattataacttagacacggtacat
agtgcttctgacaatgaagatggtaacaaagatggggaccatggttatgtggatgatgga
tcatattcacaaggtcttgatatgcatttggacaatgagttgaactcaaagaatttgccg
ccactggtaatagagcgtggtcgggagtctgttaatttaatttatgagaaacataattta
ggtgtgaaaactgaaccgtttggccagggtggatctcctaaggtaaaaatatcagcaacc
tccagccatttggaggatccagttggaatgccccccgagtggacaccgcctaatgtgagc
gtacctttgctgaatctagttgataaggtgtttcagcttaagagaagaggctggctaaga
agacaggtcttttggatatctaagcaaatattacagctggtgatggaggatgccatcgat
gactggctcttgcgccagatatattggcttcggaaggaggaaaccattaccctagggatt
cgatggattcaagatctcttgtggccaggtggtaaattctttagagcaattggggacatt
cacagcaaatttgataatagtaatctcaaccagacacctatacctctgctcagcttcagc
caatttggtgggagtaatgcctctaaacctgggtcctttgagcaacaacttgaggctact
cgtagagcaagcgacatcaaaaaaatgctttttgatggacccccagcaacattagttggc
ctgattggatataagcaataccgacggtgtgcaagagacatttactatttcactcagtct
gctatatgtatcaagcaacttgcttatgcaatcttagaacgactacttatatcagtgttc
cctgagctacgggatcttgtgatggaccttcatgcgaagaacatatcaacattgcataga
aagtag
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integrated database retrieval system
