KEGG   Gossypium hirsutum (upland cotton): 107953448
Entry
107953448         CDS       T04793                                 
Name
(RefSeq) transportin MOS14 isoform X1
  KO
K15436  transportin-3
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03013  Nucleocytoplasmic transport
ghi03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    107953448
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    107953448
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:ghi03016]
    107953448
Transfer RNA biogenesis [BR:ghi03016]
 Eukaryotic type
  tRNA transport factors
   tRNA import factors
    107953448
SSDB
Motif
Pfam: Xpo1 TPR_TNPO3_IPO13_4th TPR_TNPO3_IPO13_2nd IBN_N TPR_TNPO3_IPO13_3rd Importin_rep_3
Other DBs
NCBI-GeneID: 107953448
NCBI-ProteinID: XP_016744244
UniProt: A0A1U8P207
LinkDB
Position
D07:8897253..8915736
AA seq 962 aa
MQSTELQNTVKEALNALYHYPDDAVRMQADRWLQDFQRTIDAWQVADNLLHDATSNPETL
IFCSQTLRSKVQRDFEELPSEAFRQLRDSLNNLLKKFHKGPAIVRTQISIAVAALAVHVP
AEDWGDGGIVNWLRDGMNAHPEYIPGFLELLTVLPEEAFNYKIAARPERRRQFEKELTSQ
MEIALNILTACLSISELKEEVLEAFASWLRLKHGIPGSVLATHPLVLTALSSLNCDILSE
ASVNVVSELIHYTASGSSGGVSVQMPLIQVIVPQVMSLQAQLRDSSKDDEDVKAIARLFA
DMGDSYVELIATGSNEAMMIVNALLEVASLPEFDIASMTFNFWHNLQVILTKRNFDISFG
DEASIEAERNRRLQVFRQSYESLVSLVSSRVQYPDDYQNLSYEDLKEFKQTRYAVADVLT
DAASVLGGDTTLQILYMKLVEAVSSCRNEQSEWRPAEAALFCIRAISNYVSVVEANVMPQ
VMDLLSKLPHQPQLLQTVCLIVGAYSKWLDAAPSGFSKLPLVIDILMSGMRTSEDSAAAA
ALAFRHICDDCRKKLCAYCKQLFHIYYTAVNGEGSFKGSAEDSLHLVEALSMVITELPPE
PAKDALEELCSSVVTPLQEVINQGPEVLEKKHARELTVYIDRFAYVFRYVNHPGAVADAV
HRLWPIFKAIFDLRAWDMRTMESLCRACKYAVRTSGRFMGITIGAMLEEIQGLYQQHHQP
CFLYLSSEVIKIFGSDPSCASYLKNMIEALFKHTTCLLTSIKEFTRRPDIGDDCFLLASR
CIRYCPQLFIPSSIFPALVDCAMIGITVQHREASNSILTFLSDIFDLAKSSKGEQFLSIR
DSVIIPRGATITRILVAALTGALPSSRLETVAYALLALTRAYGMQALEWAKESVSLIPLA
AVKEVERIRFLQALSDAATGADVNVLMIPVEELSDVCRRNRTVQEIVQGALKPLELNLVP
VP
NT seq 2889 nt   +upstreamnt  +downstreamnt
atgcagagtacggagctgcagaacactgtgaaagaagccctaaatgcactgtatcattac
cccgacgatgcggtgcgtatgcaagccgatcgatggttgcaagattttcaacgcacaatc
gacgcttggcaggttgctgataatttgcttcatgatgccactagcaatccagagacttta
atattttgttcgcagacacttagaagcaaggtacaacgtgattttgaagaattaccatct
gaagcttttcgccaattaagggattccttaaataacttgttgaaaaagttccataaaggg
cctgctattgtccggactcagattagcattgcagttgctgctttggctgtacatgttcct
gcagaagactggggagatggtggcattgtcaattggcttcgagatgggatgaacgctcat
ccagagtatattccaggttttttggagctacttactgtcttacctgaggaagctttcaac
tacaagatagctgctcgtcctgaacgacgccgtcaatttgagaaagagctaacttctcaa
atggaaattgctcttaacatactgacagcttgtttaagtataagtgaattgaaagaggag
gttcttgaggcatttgcttcttggcttcggctaaagcatgggatccctggttctgtactt
gcaactcacccattggtcctaacggctctttcaagtttgaattgtgatatactttctgag
gcatctgtgaatgttgtttctgaattgatacactacacagcatcaggaagctctggtggt
gtttctgtacaaatgccattaattcaagtaattgtccctcaagttatgagtctacaagca
caacttagagattcttcaaaggatgacgaagatgtgaaagccattgctcggttatttgca
gatatgggtgattcatatgtcgaactgattgcaactggttcaaatgaagccatgatgata
gtgaatgctttgctagaagttgcttcacttcccgaatttgatattgcttcaatgacgttt
aacttttggcacaatcttcaggttatcttgacaaaaaggaatttcgatatttcatttggt
gatgaagcatccattgaagctgagagaaaccggaggcttcaagtttttcgtcaatcgtat
gagtctcttgtatccttggtgagctcccgagttcaatatcccgatgactatcaaaatctt
tcatatgaggatctcaaggagttcaaacagactagatatgctgttgcggatgtgttaact
gatgcagcatcagttttaggcggtgacacaacattacaaattctgtacatgaagcttgta
gaggctgtatctagctgtagaaatgaacagagtgaatggcgtccagctgaggctgcttta
ttttgcattcgagctatatcaaattatgtttcagttgttgaagcaaatgtaatgcctcag
gttatggatctgctttcaaaactgcctcatcagccccagcttcttcagacggtgtgctta
atcgttggagcatactctaagtggcttgacgctgcaccaagtggtttctctaagttgcct
ttggtgattgatattctcatgagcggcatgcgtacctctgaagattctgcagcagctgct
gctttggcatttaggcacatttgtgatgattgccggaaaaagctttgtgcttactgtaaa
cagcttttccatatatactatacagcagttaatggggaaggtagttttaagggctctgct
gaggactcattgcacttggtagaagctttgagcatggttattaccgaacttccaccggag
cctgctaaggatgccttggaggaactgtgctcatcagttgttactcctttacaggaagtt
atcaaccaaggaccagaagttttagagaagaaacatgctcgagaattaacagtttacata
gatcgatttgcatatgtctttcggtatgtgaatcatcctggagcagttgcagatgcagtt
cacaggctttggccaatattcaaagccatatttgatcttcgtgcttgggacatgcggacc
atggagtctctttgccgtgcctgcaaatatgctgtgagaacttctggaagatttatggga
atcacaattggagcaatgcttgaagaaattcagggcctgtatcaacaacaccaccagcct
tgcttcctttatctctctagtgaagttataaagatatttggctctgatccttcttgtgca
agctacctcaaaaatatgatcgaggcgcttttcaagcacacaacatgtcttctcacaagt
attaaggagttcaccagaagaccagacattggagatgattgttttctgttggcatcaagg
tgcattcgttattgtcctcaattattcattccttcttccatatttccagctttagtagat
tgcgcgatgattgggatcacagtgcagcacagagaggcctccaattccatcttgaccttc
ttgtctgatatctttgatcttgcaaagtctagcaagggagaacaatttttatccataagg
gatagtgtcattattccgcgaggagctaccattactagaatcctggtggcggccctaact
ggagcactcccaagttctcgattagagacggtagcatatgcacttctagcactaactcga
gcatatgggatgcaagctctggagtgggctaaggaaagtgtttcattgattccattggct
gctgtcaaggaagtagaacgcataagatttttgcaagctttgtcagatgctgccaccgga
gctgatgtcaatgtcctgatgatccctgttgaagagttatctgatgtttgtcgtcgtaac
cgaacagttcaagagattgtgcaaggagcgctaaagccacttgagttgaatctggtacct
gtaccatag

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