Gossypium hirsutum (upland cotton): 107953572
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Entry
107953572 CDS
T04793
Name
(RefSeq) recQ-mediated genome instability protein 1
KO
K10990
RecQ-mediated genome instability protein 1
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
107953572
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ghi03400
]
107953572
DNA repair and recombination proteins [BR:
ghi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
107953572
FA (Fanconi anemia) pathway
107953572
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Motif
Pfam:
RMI1_C
RMI1_N_C
RMI1_N_N
DUF538
Motif
Other DBs
NCBI-GeneID:
107953572
NCBI-ProteinID:
XP_016744405
UniProt:
A0A1U8NZV9
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Position
D07:5933907..5938850
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AA seq
569 aa
AA seq
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MARRRLRLHRSSDEEPPPPQQQLENEPPHESSAVTNQSVTVSPPNPNPDQTLQISDDDFV
DVDESFTPPSPPPLAEEMAAPVTSVESSGSPIGDFLLRMGLKLRREWLDSCVQGLESSVP
RFSTLDASAKSKLCFQQFLFSDMNYSGGGILPSNVDSMHLVDLKGPFVLQVDEIVNISCP
LKGRYQETPSGIKRCLKLSMTDGVQRVFGMEYRHIKDLQVLAPAGLKVAICNVHIRHGLL
VLVPESLQILGGVVEDLEAARQRLVTEVNKPPRGKRTKSGVVPPLATRATLAAWPPNGVN
AVEPTNNLISQNSAPLRADERGATLVSSSTVTLRTTENPTAHMGGANAVPNSSSDVALDV
ERMHIDSVPISRENATSNSNSSIVPDDELVHIVDVVEHPLILSGDREVPFTYLASLSAKW
AAIKDKATQVQGKIKCFLTGVKGFRYKQRTTYELLCYVDDGSLISEILIDHNVVQKGIGH
SPQEVTSALSSSDKQKVSGMKEIMRQFQAFLAHFEGMMLVEINKTSSLPIAKEMTQGCSA
SDARLLLRRLKPPPRTPEHRSSDPIEISP
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggcgagaagacgactaagactgcaccgctcctccgacgaagaaccaccaccaccacaa
caacaactagaaaatgaacctccacatgaaagctccgccgtcactaaccagtccgtgact
gtatctcctcctaaccctaaccccgaccaaacacttcaaatctccgacgacgatttcgtc
gatgtcgatgaaagtttcactcctccttctcctcctcctctggcggaggaaatggctgca
ccggttacatcagttgaaagctctggctctccgattggggactttcttttaagaatggga
ctcaaattgaggagagaatggctggattcttgcgttcaaggactagagagctcggtccct
aggttttcgactctcgatgcttctgcaaaatcgaagctttgctttcaacaattcttgttt
tctgatatgaattattccggcggcggtattcttccgtcaaatgttgattcaatgcatctt
gttgatctcaaaggaccctttgtcttgcaggttgatgaaattgtaaatatcagttgtccg
ctcaaaggaaggtatcaggagacaccttctgggatcaagaggtgccttaagttatccatg
acagatggtgttcaacgtgtgtttggcatggaatacaggcatattaaagatcttcaagtt
ttggctcctgctggattaaaggttgctatctgtaacgtacatatacgacatgggcttctt
gtgctggtccctgaaagtttacaaattttagggggagtggttgaggacttagaagcagca
cgacagcgtcttgttactgaagtaaacaagccacctaggggtaaaagaacaaagtcagga
gtggttcctcctttagcaactagagcaactcttgctgcatggccaccaaatggtgttaat
gctgttgagccaactaacaatttaatatctcaaaattcagctcctcttcgggcagatgaa
agaggtgctactttggtttcatctagcactgttactctaagaactacagagaatcctact
gctcatatgggtggggcgaatgctgtgcctaattcttcatctgatgttgctttggatgtt
gagaggatgcatattgatagtgttcccattagcagagaaaatgctacatcaaactcgaat
tcaagtattgttccagatgatgagctcgtccatatcgttgatgtggttgaacatcctctc
atactgtctggagaccgagaagtaccctttacatacttggctagtttgtcagccaagtgg
gctgccattaaagataaagctacacaagtacagggaaaaattaagtgctttttgactggt
gttaagggattccggtataagcaaaggacaacttacgagctgctgtgttatgttgatgat
ggcagtcttatctccgagatcctcattgatcacaatgttgtgcagaaaggaataggtcat
tctccccaggaggtcacttctgctctttcttcttcagacaaacaaaaagttagtggtatg
aaggagattatgaggcagtttcaggcatttttagcacattttgagggaatgatgcttgta
gaaataaacaaaacatcatctcttccaattgccaaggagatgacccaaggctgttctgca
tctgatgcacggttgcttcttagaagattgaagcctcctcctcgaacaccagagcaccgg
tcatcggatcccattgagatatccccttaa
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