Gossypium hirsutum (upland cotton): 107953605
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Entry
107953605 CDS
T04793
Name
(RefSeq) polyadenylate-binding protein 1 isoform X1
KO
K14396
polyadenylate-binding protein 2
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107953605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107953605
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
107953605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
HDV_ag
DUF7491
NET2A
RRM_7
CC149
Tup_N
RBD_DEAH11
Lge1
Fez1
ABC_tran_CTD
Motif
Other DBs
NCBI-GeneID:
107953605
NCBI-ProteinID:
XP_016744449
UniProt:
A0A1U8P2L4
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Position
D07:complement(5400036..5403594)
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AA seq
228 aa
AA seq
DB search
MEQYEEQEHEVYGGEIPDEEGEVDADMSGGAEDYEGNEHDLEHDPNSNSKDLEDMKKRLK
EIEDEAGALREMQAKVEKEMGAVQDSSGASATQAEKEEVDSRSIYVGNVDYSCTPEEVQQ
HFQSCGTVNRVTILTDKFGQPKGFAYVEFVEIDAVQNALLLNETELHGRQLKVSAKRTNV
PGMKQYRGRRPNPYFRSRRPFMPGPVFYPPYSYGRVPRFRRPTRYRPY
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atggagcaatatgaagagcaagagcacgaggtgtacggaggggagattcccgatgaggaa
ggagaggtggacgctgacatgtctggtggagctgaagactacgaaggcaacgaacatgat
cttgagcacgatcctaattccaactccaaggatttggaggacatgaaaaagagacttaaa
gagatcgaggatgaggccggagctttacgtgaaatgcaagctaaagtcgagaaggaaatg
ggcgctgtccaagattcctcaggtgcttctgcaactcaagctgaaaaggaggaagtcgat
tcgcgctcgatttatgttggtaatgtagactactcatgtacacctgaggaagttcagcag
catttccaatcctgtggaacagttaacagagtgacaattttgaccgacaagtttggtcaa
cctaaaggattcgcctacgttgaatttgttgaaatcgacgctgttcaaaatgctctgctg
ttaaatgaaacagaattgcatggtcgtcagttgaaggtctctgcaaagaggacaaatgtt
cctggaatgaaacaatatcgaggaaggcgacccaacccatatttccgctcccgaagaccg
tttatgcctggtcctgttttctatcctccatatagctatgggagggttccaaggttcagg
cggccaaccagatacaggccatattag
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