KEGG   Gossypium hirsutum (upland cotton): 107953670
Entry
107953670         CDS       T04793                                 
Name
(RefSeq) serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' kappa isoform-like
  KO
K11584  serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    107953670
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ghi01009]
    107953670
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ghi03019]
    107953670
   03036 Chromosome and associated proteins [BR:ghi03036]
    107953670
Protein phosphatases and associated proteins [BR:ghi01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-2 (PP2A)
    Regulatory subunits
     107953670
Messenger RNA biogenesis [BR:ghi03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Protein phosphatase 2A
     107953670
Chromosome and associated proteins [BR:ghi03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   Other centromeric chromatin formation proteins
    PP2A (protein phosphatase 2A)
     107953670
SSDB
Motif
Pfam: B56
Other DBs
NCBI-GeneID: 107953670
NCBI-ProteinID: XP_016744537
UniProt: A0A1U8NZZ8
LinkDB
Position
D07:4766905..4770536
AA seq 502 aa
MLRQFLSKLPRKSGKSDSPELTRSTSCTTAGSTPQPHRSNSLNLGSGRPCAPKRTSSAVF
PASVVAGIEPLLPFKDVPNSEKMNLFVSKVSLCCVTFDFTDPTKNLIEKDVKRQTLLELL
DFVSGSVRFSEPAILAMCRMCAVNLFRVFPPNYRSAVSNGGENDDDEPMFDPAWPHLQIV
YDLLVKFITSSCLDAKVAKKYIDHSFILRLLDLFDSEDPRERDCLKTILHRVYGKFMVHR
PFIRKAISNIFYRFVFEIERHNGIAELLEIFGSIISGFALPLKEEHKIFLWRVLIPLHKP
KSLGVYFQQLSYCVSQFIEKEPKLCSTVIRGLLKYWPITNSQKELMFLAELEEILEAINM
VEFQKVMVPLFWRIGCCINSFHFQVAERALFFWNNDQIVNLIAHNRHVILPIILPALEKN
AQNHWNHAVLNLTINVRKMFMEMDDQLFISCHIHFKEEEAKVSILSEKRKEAWKQLENAA
SLKPIAGNTAVLVTPLATPIAY
NT seq 1509 nt   +upstreamnt  +downstreamnt
atgttaaggcaattcctcagtaaactcccacgaaaatccgggaaatcggactcgcccgag
cttactaggtcaacctcatgcacgacagcggggtccactccgcaacctcaccgatccaac
agtttgaatttgggttctggccgtccctgcgctccaaaacgaacatcttccgctgttttt
ccggcaagtgttgtggcgggaatcgagccattgttgccattcaaagatgtaccaaattcg
gaaaagatgaatctttttgtgagtaaagttagcctttgttgtgtaacttttgatttcact
gacccaactaaaaatttaattgaaaaagatgttaaaagacaaaccttgctagagctgttg
gattttgtgtcagggtccgttagatttagcgaacctgcaattttagccatgtgtaggatg
tgtgctgtgaatttgtttagagttttcccacccaattatcggtctgctgtaagtaatgga
ggtgaaaatgatgacgatgagccgatgtttgatccggcttggccacatttgcaaattgtg
tatgatttgctagttaagtttatcacttcttcttgtctcgatgcaaaagtagctaaaaag
tatatagatcattcctttattttgagattgcttgacttgtttgattcggaggatccaagg
gaaagggattgtttgaagacgatactgcatagggtttatgggaagttcatggttcataga
ccttttattcggaaggctataagcaatatattttatcggtttgtttttgagattgagagg
cataacggcattgctgagttattggagattttcggcagtataatcagtggatttgctttg
cctttgaaggaggagcacaagatcttcttgtggagggttttgattcctcttcacaagcca
aaatctttgggtgtttattttcaacaattgtcttattgcgtttctcagttcattgagaag
gagccgaagttgtgtagtacagtgatacgggggttgttgaagtactggcccataacaaac
agccaaaaggagttgatgtttcttgctgagttggaagagattttggaagccattaacatg
gtggagttccaaaaggttatggtcccattattctggcggattggctgttgcattaacagt
ttccatttccaggttgctgaaagggcacttttcttttggaataacgatcaaattgtaaac
ctaattgcacataaccggcatgtgattttgcccatcatacttccagccttggaaaagaat
gcccagaaccattggaatcatgcggtgctcaacttgacaataaatgtccgaaagatgttc
atggagatggatgatcaactattcatatcttgccatattcactttaaggaggaagaggcc
aaggtaagcatattatctgagaaacggaaggaagcatggaagcaactagaaaatgcagcc
agtctcaagccaatagccggaaataccgctgtactggtaactcctttggcaacaccaatt
gcctattaa

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