Gossypium hirsutum (upland cotton): 107953715
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Entry
107953715 CDS
T04793
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 18
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ghi01002
]
107953715
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107953715
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
107953715
Peptidases and inhibitors [BR:
ghi01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
107953715
Ubiquitin system [BR:
ghi04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
107953715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
ANCHR-like_BBOX
zf-HIT
Motif
Other DBs
NCBI-GeneID:
107953715
NCBI-ProteinID:
XP_016744593
UniProt:
A0A1U8P2L2
LinkDB
All DBs
Position
D07:4088908..4095060
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AA seq
575 aa
AA seq
DB search
MPSIPIDNDVSTCAVCSNPASKKCSRCKSVRYCSLTCQKVHWKDGHKTKCKVNSAQTANT
KSFSGVALVPARGTSTISKKPTEVLFPYNEFVELFNWEKPGFPPRGLLNCGNSCFANVVL
QCLASTRPLVAYLLEKGHRKECRRNDWCFLCELQIHIERSSQSLHPFSPTNILSRLPNIG
GNLGYGRQEDAHEFMRFAIDTMQSVCLDEFGGEKAVDRSSQETTLIQHIFGGHLQSQVIC
TNCNKISNQCENMMDLTVEINGDASSLEECLDQFTVREWLHGENMYKCDGCNDYVKAWKR
LTILWAPNILTIALKRFESGQFGKLNKRVSFPETLDLTSYMSGDGDDTNVYKLYAVVVHL
DMLNASFFGHYICYTQDFNGNWYRIDDCKVMRVELAEVLSQVAYMLLYSRVSVRPSCLKT
SGTQGNDEQKSMKALVEHCPKEQIQCLPENESITSSLSPSLSLNGSLHSEIPGLKVESST
GMNTDAQPQDGDVVRLKSNSSLSEEVFFHENNSCLQIDSEVIQINGDDMDKVNSIAVRGN
PENMDRISTLPCSTDMKRICRSDKDLFDATNSEDI
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgccttccatccccatcgacaacgacgtctctacttgcgccgtttgttccaatcccgcc
tccaagaagtgctcgcggtgtaaatctgttcgttattgttccttaacttgccagaaggtg
cactggaaagacgggcataagacaaagtgcaaagtaaattcagcacagactgctaacaca
aaatcattttcaggagttgctttggttcctgcccgcggaacctctacaatcagcaagaag
ccgacagaggttcttttcccatataatgagtttgtagaacttttcaactgggagaaacca
ggattccctccgcgtggactcttaaattgtgggaatagttgctttgccaatgttgttctg
caatgccttgcttctactcggcctcttgttgcttacttattggagaaagggcatcggaaa
gagtgcagacgtaatgattggtgctttctgtgcgaacttcaaattcacattgaaagatca
agccaaagtcttcatccattttcaccaactaatattctctcaaggttgcctaatattgga
ggtaatcttggttatggaagacaggaggatgctcatgaattcatgaggtttgctattgat
acaatgcaatcagtctgccttgatgaatttggtggagaaaaagcagttgatcgtagctct
caagagacaacccttattcagcacatatttggtggtcatctacagtcgcaggtgatttgt
acaaattgcaataagatttcaaatcaatgtgaaaatatgatggatttaactgttgaaatt
aatggagatgcttcatcgttggaggaatgccttgaccaattcactgttagagagtggctt
catggggaaaatatgtacaaatgtgatggttgcaatgactatgtcaaggcatggaagcgg
cttactatactatgggctcctaacattcttacaattgccttaaaaagatttgagagtggc
cagtttgggaaactcaacaaaagagttagctttcctgagacattagatcttacctcttac
atgagtggagatggagatgataccaatgtatacaaactttatgcagttgttgtccatttg
gatatgttaaatgcatccttttttggtcattacatctgctatacccaagatttcaatgga
aattggtatagaattgatgactgtaaggttatgagggttgaattggcagaggtcctttct
caggttgcatatatgcttttatatagcagggtttctgtacgcccctcatgtcttaaaact
tcaggaactcaggggaatgatgaacagaaatcaatgaaagctttagttgaacattgtcca
aaggagcaaattcagtgcctacctgaaaatgagtccatcacttctagtctttctccgtcc
ttgtcattgaatggtagtttgcattcagaaattcctggacttaaagttgagtcatctaca
ggaatgaatactgatgctcaacctcaggatggtgatgtggttaggttaaagtccaactcc
tctctttctgaggaagttttcttccatgaaaacaactcatgtttacagattgattcagaa
gttatccaaataaatggtgatgatatggataaggttaattctatagctgtgagaggaaat
ccagagaatatggataggattagtactctgccatgttctactgatatgaagaggatttgc
aggtctgacaaagatctatttgatgcaaccaactccgaagatatataa
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