KEGG   Gossypium hirsutum (upland cotton): 107953719
Entry
107953719         CDS       T04793                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 10
  KO
K03134  transcription initiation factor TFIID subunit 10
Organism
ghi  Gossypium hirsutum (upland cotton)
Pathway
ghi03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    107953719
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ghi03021]
    107953719
   03036 Chromosome and associated proteins [BR:ghi03036]
    107953719
Transcription machinery [BR:ghi03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     107953719
   Coactivators
    SAGA/TFTC/STAGA complex
     107953719
Chromosome and associated proteins [BR:ghi03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     107953719
    STAGA complex
     107953719
    TFTC complex
     107953719
    SAGA complex
     107953719
    SLIK complex
     107953719
SSDB
Motif
Pfam: TAF10 Bromo_TP
Other DBs
NCBI-GeneID: 107953719
NCBI-ProteinID: XP_016744597
UniProt: A0A1U8P058
LinkDB
Position
D07:4050122..4052303
AA seq 186 aa
MIRRTVYYYYYYYTHEAAAENRFGSLIININKKHIAKAESAQLGKRRKERMNHNPQSSDG
KHDDDSALSDFLASLMDYAPTIPDELVEHYLAKSGFQCPDVRLIRLVAVATQKFVAEVAS
DALQHCKARQAAVVKDKREKQQKDKRLILTMDDLSKSLREYGVNVKHQEYFADSPSTGID
PASREE
NT seq 561 nt   +upstreamnt  +downstreamnt
atgattaggcgtacagtttattactattattattattatacacatgaggcggccgcagaa
aataggttcggttcattaatcattaacataaacaagaagcatatagcgaaggcagagagc
gcacagttgggaaaacgaaggaaagagagaatgaaccacaacccgcaatccagcgatggg
aagcacgatgatgactctgctctctccgatttccttgcctctcttatggattatgctccc
actatacctgacgaattggtggaacattacttagccaagagtggatttcaatgtcccgat
gttcgattaataaggctcgttgctgttgccactcagaagttcgttgcggaagttgcaagt
gatgcacttcagcattgcaaggcaaggcaagctgcagtcgtcaaagacaaaagggagaag
cagcaaaaggataagcgcctaatcttgacgatggacgatctttcaaagtcattgcgcgag
tatggggtgaatgtgaagcaccaggagtattttgctgacagcccgtcaaccggtatcgat
cccgcttctagagaggaatag

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