Gossypium hirsutum (upland cotton): 107953804
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Entry
107953804 CDS
T04793
Name
(RefSeq) VAMP-like protein YKT61
KO
K08516
synaptobrevin homolog YKT6
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
107953804
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107953804
Membrane trafficking [BR:
ghi04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Ykt6
107953804
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Gene cluster
GFIT
Motif
Pfam:
Longin
Synaptobrevin
AcrIIA4
Motif
Other DBs
NCBI-GeneID:
107953804
NCBI-ProteinID:
XP_016744704
UniProt:
A0A1U8P3C9
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Position
D07:complement(3219400..3223042)
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AA seq
199 aa
AA seq
DB search
MKITALLVLKCMPEGADPIILANACDVSHFGFFQRSSVREFIVFVSRTVAKRTPPGQRQS
VQHEEYKVHSYNRNGLCVIGFMDDHYPVRSAFSLLNQVIDEYQKNFGESWRTAQADSTEP
WPYLDNALTKYQDPAEADKLLKIQRELDETKIILHQTIDSVLARGEKLDSLVEKSSDLSA
ASQMFYSQAKKTNQCCSIL
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcacggcgttattggtgttgaagtgcatgccggaaggagccgatccgataata
ctagccaatgcttgcgatgtgagccatttcggtttcttccaaaggtcaagcgttcgggag
tttatcgtctttgtttctcgaaccgtcgccaaacgaacccctcccggtcagcgccagtcc
gtccagcacgaagagtacaaggtacattcttacaacagaaatggactttgtgtaattgga
tttatggatgatcactaccctgttcgaagtgctttttcgcttctcaaccaggtgatagat
gaatatcagaaaaacttcggggaatcatggagaactgcacaagctgatagcactgaacct
tggccctatttggataatgctttgaccaaatatcaggaccctgcagaggcagataaatta
ttgaaaattcagagggagttggatgaaactaaaatcatccttcatcaaactattgatagt
gtgcttgcacgaggtgagaagctggacagtttagttgagaagagttcagatctgagtgcg
gcatctcagatgttctacagtcaggctaagaaaaccaatcaatgttgtagtatactgtaa
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