Gossypium hirsutum (upland cotton): 107954018
Help
Entry
107954018 CDS
T04793
Name
(RefSeq) adenine DNA glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
107954018
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ghi03400
]
107954018
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
107954018
DNA repair and recombination proteins [BR:
ghi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
107954018
Prokaryotic type
107954018
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
NUDIX_4
HHH
EndIII_4Fe-2S
ISET-FN3_linker
Motif
Other DBs
NCBI-GeneID:
107954018
NCBI-ProteinID:
XP_016744955
UniProt:
A0A1U8P1H8
LinkDB
All DBs
Position
D07:complement(11879718..11882450)
Genome browser
AA seq
451 aa
AA seq
DB search
MAKTNKTKRPQLIKQEEQIGDIEDLFSEEDTHKIRASLLEWYDKNQRDLPWRTSTKKSEN
GENVQEEEEEEKRAYGVWVSEVMLQQTRVQTVIDYYNRWMLKWPTLQHLSQASLEEVNEM
WAGLGYYRRARFLLEGAKMIVAEGSEFPNTVFALRKVPGIGDYTAGAIASIAFKQVVPVV
DGNVVRVLARLKAISANPKDKTTVKNFWKLAAQLVDPSRPGDFNQSLMELGATLCTPLNP
NCTSCPVSSQCRALHNSRNDESVMVMDYPMKVVKTKQRNDFSTVSVVEISRSQDRLQQTK
SNSRVLLVKRPDEGLLAGLWEFPCVTLDEEADLSMRRKLIDQLLKKSFKLNPPKNCNVIS
RELVGEFVHVFSHIRRKIYVELLVLHLKGGKHVLFEEDDINATDWKLLDCEAVSRMGLTS
SVRKVYSMVQKFKQDGTSNNSVPLRKRPKCS
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaccaacaaaacgaagagaccacagttgatcaagcaagaagaacagataggt
gacatagaagatttgtttagcgaagaagatacccacaaaataagggcatcgttgttagaa
tggtacgacaagaaccaaagagacctcccatggagaacatcaacaaaaaaatcagaaaat
ggcgaaaatgttcaagaagaagaagaagaagaaaagagagcatatggagtatgggtttcg
gaagtgatgctgcaacaaacaagggttcaaactgtaattgattattataatcgttggatg
ttaaaatggcctactcttcaacacctttcccaagcttctcttgaggaagtgaatgagatg
tgggctgggttagggtattacagaagagctcgttttcttctagagggagccaagatgatt
gttgctgagggaagtgagttcccgaatactgtttttgccttgaggaaggttcccggaata
ggagattatacggccggagcaatcgcttcaatagcattcaaacaggtagtgcctgttgtt
gatggaaatgtagttagggtgcttgcaagactaaaggcaatttccgctaatccaaaagac
aaaactactgtcaagaacttctggaagctagcagctcaactcgtcgatccttcacgacct
ggggattttaaccagtcactaatggaacttggtgcaactttatgcaccccattgaaccca
aactgcacttcgtgtcctgtttcgagccaatgtcgtgcgttacataattccagaaatgat
gagtcagttatggtgatggattatcctatgaaagtggtaaaaaccaaacaaagaaatgat
ttttccaccgtcagtgttgtggagatatccagaagccaagatagattgcaacaaaccaaa
tccaacagcagagtccttctcgtcaaacggccggatgaaggtttacttgccggtctttgg
gagttcccgtgtgttacattggatgaagaagctgacttatccatgaggagaaaactaatt
gatcaactattgaagaaatcatttaaacttaaccctccaaagaactgtaacgtaatttct
agggaacttgtcggggaatttgtccatgttttcagtcacattcgccgtaagatctatgtc
gagttgttggtgttacatcttaaaggtggaaagcatgtcttgttcgaagaggatgacata
aacgccacggattggaagcttttggactgcgaagccgtttcgaggatgggattgacatcg
tctgtaaggaaggtatactccatggttcaaaaattcaaacaagacggaacatccaacaat
tccgtcccattgaggaaaaggccaaagtgttcatga
DBGET
integrated database retrieval system
