Gossypium hirsutum (upland cotton): 107954040
Help
Entry
107954040 CDS
T04793
Name
(RefSeq) tRNase Z TRZ2, chloroplastic
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ghi03016
]
107954040
Enzymes [BR:
ghi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
107954040
Transfer RNA biogenesis [BR:
ghi03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
107954040
Prokaryotic type
107954040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
PDEase_II
Motif
Other DBs
NCBI-GeneID:
107954040
NCBI-ProteinID:
XP_016744985
UniProt:
A0ABM3AF09
A0A1U8P1K9
LinkDB
All DBs
Position
A07:complement(14357523..14362028)
Genome browser
AA seq
366 aa
AA seq
DB search
MQFPFNSISNKQEMQISLPIVPSKIPSIFPFHHPIYPPHPPHKSLSFQTQASPFKSLKTS
GYLSTISRAIDEEEEYRKARAAVTRKGIEVEGYFIEGLSIGGHETCVIVPELKSAFDIGR
CPSRAIHQNFVFITHAHLDHIGGLPMYVASRGLYNLKPPAVFVPPCIKEDVEKLLDIHKT
MGQVELNLDLVALDVGETYELRNDIVVRPFRTHHVIPSQGYVVYSVRKKLKKQYIHLKGK
QIEKLKKSGVEITDIVLSPEVAFTGDTTAEYMLDPRNADALRAKILITEATFLDDGYSID
HARQHGHTHLSEIIENAQWIRNKAVLLTHFSSRYSIEDIRQAVSKLQSKLSAKVVPLTEG
FKSIHT
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgcagtttcccttcaattccatctcaaataaacaagaaatgcaaatctctctccccatt
gtaccctccaaaatcccttcaattttcccattccaccaccctatttatccacctcatcca
ccccacaaaagcctctctttccaaacccaagccagcccctttaaatccctcaaaacctcc
ggctatttatcaaccatcagccgtgctatagatgaagaagaagagtaccgtaaagccaga
gctgctgtcacgagaaagggtattgaagttgaaggctacttcattgaaggactctctatt
ggtggccatgaaacctgtgtcatcgtccctgaattgaagtctgcttttgatatcgggagg
tgcccatctcgtgctattcatcagaattttgttttcatcactcatgctcatcttgaccac
attggtgggctgccgatgtatgtggctagccgtggtttgtataacttaaagcccccggcg
gtatttgtacctccatgtattaaagaagatgtggagaagctgttggatattcacaagaca
atgggacaagtggaactaaaccttgatttggttgcacttgatgttggtgaaacatatgaa
ctacggaatgacattgttgtccgaccatttagaactcaccatgttataccaagccagggt
tatgtcgtatactctgttagaaaaaagctgaagaagcagtacattcatctgaaagggaaa
cagatcgagaagttgaagaagtctggtgttgagatcacagacattgtattgtctccggag
gtggcttttacaggagatacaacagcagaatacatgcttgatccacgtaatgcggatgca
ttgagggccaaaattctcataactgaggcaacgttccttgatgatggttatagcattgat
catgctagacaacacggtcatacacatttatcagagatcattgaaaatgctcagtggatc
aggaacaaagctgtcttgttaactcatttctcctcccgctatagtatagaggacattcga
caagctgtttcaaagttgcagtctaaattatcagcaaaggtcgttcccctaacagagggt
ttcaaatcaattcacacatag
DBGET
integrated database retrieval system
