Gossypium hirsutum (upland cotton): 107954147
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Entry
107954147 CDS
T04793
Name
(RefSeq) U-box domain-containing protein 13 isoform X1
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
107954147
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ghi04121
]
107954147
Enzymes [BR:
ghi01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107954147
Ubiquitin system [BR:
ghi04121
]
Ubiquitin ligases (E3)
U-box type E3
107954147
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
HEAT_2
zf-RING_UBOX
MLKL_N
Neurochondrin
zf-C3HC4_4
zf-Nse
MCAfunc
zf-C3HC4_2
Arm_2
HEAT_EZ
zf-C3HC4
zf-rbx1
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
107954147
NCBI-ProteinID:
XP_016745110
UniProt:
A0A1U8P1W7
LinkDB
All DBs
Position
D07:complement(13484859..13489443)
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AA seq
669 aa
AA seq
DB search
MEEEKGVLVQSLIDAVNQIASISDYRCSVKKEYCNLARRLKLLTPMFEEIRESKEQIPEK
TVKALLSLKEALISAKELLSFGSEGSKIYLVLEREQIMHKFLEVTAQLEQALRGISYENL
YISDEVKEQVELVLAQFRRAKGRVDAPDVELYEDLLSLYNKSDDAELNPDVLWRLAKKLQ
LVGIAELTQESLALHEMVSASVGDPGETFEKMLSLLKKIKDFIQTENPNLDAPAREKNLP
PSSSGQATTNGNRKTPVIPDDFRCPISLELMKDPVIVSTGQTYERSCIEKWLEQGHGTCP
KTQQALSSPALTPNYVLRSLIAQWCEANGIEPPKRPSTRPSKTTSACSPAERTKIEILLR
KLASSSPEDQRMAAGEIRLLAKRNADNRVAIAEAGAIPLLVSLLSTPDSRIQEHAVTALL
NLSICEDNKGSIISSGAVPGIVQVLKKGSMEARENAAATLFSLSVVDENKVTIGASGAIP
PLVVLLSEGTQRGKKDAATALFNLCIYQGNKGKAVRAGVVPILMRLLTEPGGGMVDEALA
ILAILASHPEGKSAIGAAKAVPVLVGVIGNGSPRNRENGAAVLVHLCSGDQQHLAEAQEL
GVMGPLVDLAQNGTDRGKRKAAQLLERMNRFVEQQKLAQVQAEAEVQQPESQSQTQQRRP
PSVENAIEG
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagagaaaggagtgctggtgcagagcttgatcgatgcggtgaaccaaatagct
tcaatcagcgactacagatgctccgttaagaaggagtactgcaatctcgctaggaggctc
aagctgttgacgccaatgttcgaggagattagagaaagcaaagagcaaatccccgaaaaa
actgttaaagctttgctctcgttgaaagaagctctcatttcggctaaggaactgctcagt
ttcggcagtgaaggcagcaagatttacctggttctagagagggagcagatcatgcataaa
tttcttgaagtaacagcacaattggaacaagctttgcgaggaatttcctatgagaatctt
tacatatcagatgaagttaaggaacaggtggagcttgtactagctcagttcaggagagct
aaaggaagagttgatgcgcctgatgttgagctgtatgaggatctattatcactgtacaac
aagagcgatgatgcagaactaaatccagatgtactatggagattggctaagaagttacaa
ttggtcggcatagctgaacttacgcaagaatcattagctctacatgagatggtttctgcc
agtgttggagatcctggtgaaacatttgagaagatgttgagcttattaaagaaaatcaaa
gactttatacagacagaaaatcctaacttggatgctcctgcaagagaaaagaatcttcct
ccaagtagcagtgggcaagcaactactaatggaaatcgcaagactccagttataccagat
gatttccgctgtccaatatccctggagttgatgaaggatcctgtcattgtttcgactggg
cagacttatgaacgttcttgcattgagaaatggctggagcaagggcatggaacatgtcca
aagacgcaacaggcactcagtagccctgcccttacacctaattatgtattgcgtagtcta
atagctcaatggtgtgaggcaaatggtattgaaccacccaaaagacccagcactcgtccc
agtaaaactacatctgcctgctcaccagctgaacgtactaagattgaaattctcctccgt
aagctcgcatccagcagtcctgaagaccagagaatggctgcaggtgaaatccgtcttctt
gccaaacgcaatgcagataaccgtgtggccattgctgaagctggggccatacctctcctt
gtgagccttctttcaacacctgattcacgcatccaagaacatgctgttacagcacttctt
aacctttctatttgtgaagataacaaaggaagtatcatatcctctggagcagttcctggt
atagtccaggtgcttaagaaggggagcatggaagctagagagaatgcagcagccactctt
ttcagcctttcagtagtggatgaaaataaggtgacaattggtgcctcgggagcaatccct
ccattagtggtactgctaagtgaaggaacgcaaaggggcaaaaaggatgcagcaacagca
ctcttcaacttgtgcatttaccaagggaacaagggaaaagcagtgagggctggtgttgtg
cctatattaatgcgtttgttgacagaaccgggtggtggaatggtggatgaggcattggcc
atactagcaatacttgcaagccatcctgaagggaagtctgccattggagcagcaaaggca
gtgccggttttggtaggtgttattggaaatggatctccaaggaacagagagaatggagct
gcagttttggttcacctttgttccggagatcaacaacatttagcagaggcccaggaacta
ggagtgatgggtcctttggtggacttggcacaaaatggtacagataggggcaagcgcaag
gctgctcagttgttagagcgcatgaacaggtttgttgagcagcaaaaattggcacaggtg
caagctgaggccgaagtacagcagcccgagtctcagtctcagacacaacagcgacgacca
ccctctgtggagaatgctattgagggctga
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