Gossypium hirsutum (upland cotton): 107954151
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Entry
107954151 CDS
T04793
Name
(RefSeq) uncharacterized protein LOC107954151 isoform X1
KO
K17925
sorting nexin-13
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ghi04990
]
107954151
Domain-containing proteins not elsewhere classified [BR:
ghi04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
107954151
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
Motif
Other DBs
NCBI-GeneID:
107954151
NCBI-ProteinID:
XP_016745117
UniProt:
A0A1U8P1M4
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Position
D13:complement(3801704..3808685)
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AA seq
1040 aa
AA seq
DB search
MKSMETIQDLIEDAKVRTVWWALATFVVTYFLTHTSTSMWMNLPIAILIVAGLRILSNEV
EFKWKVKSVGVLSYLSHLEKKQLSVNDSRLSSSSPPLKWKRKIDSPMVEAALNELIDKIL
RDFVVDLWYSEITPDREAPELMRDVILDAIGEISGRAKEINLVDLLTRDIVDLIGDHLDL
FRRNQAAIGVDVMVTLSSEERDERLKHHLMVSEELHPALISPESEYKVIQRLIGGVLAVV
LRPREAQCPLVRTIAREIVTCLVVQPLLNLANPGCINEVIEYVLLAINDGMIKVVEGFDQ
SSVEVRGDVSSSSKIASFNSQGTDLTLARLDDQKETYSDSNRCEEESVQPRPADWARKLE
AATQRRTEVLAPENLENMWTKGRNYKKKEKKYVNTRFQEAIPRGSVTKSAVLTGYPGSEI
STNNVGTSTGSEEKTVMQTMPGLNLDAQLFDGNTAGTQLASEFNNLSSFGGDHHVNNFND
ASEQSADGNKSRLKRSSSSSDLNVEPDTKKVFTGDVREPIISEFYSPDFGRHTEEYRGKI
TSNTVLRNEEPHVPKLRCRVIGAYVEKLGSKSFAVYSIAVTDAENRTWFVKRRYRNFERL
HRHLKEIPNYTLHLPPKRIFSSSTEDTFVHQRCIQLDKYLEDLLSIANVAEQHEVWDFLS
VSSKNYSFGKSSSVMRTLAVNVDDAADDIVRQFRGVSDGVMCKAVDSSSPPSEASSSVTG
RTLSWSADEIAKDISRQSNLETVHSASDNEEGDKDSSHGHEDDRSGSQGHGWHPDFELNT
SLPPRVIEHGGESGNLVSEKHNLGVKTELLGQQGSPAIKFPTTSSHMEDPVGMPPEWAPP
NMSVPLLNLVDNVFQLKRRGWLRRQVFWISKQILQLVMEDAIDDWLLRQIYWLRREDTIA
LGIRWIQDILWPGGTFFTKAGNIQGKFENTRPNQTPSQNFSQFGGGNVNKPGSFEEQLEA
ARRASSIKKMLFDGAPTALVSLIGHKQYRRCARDIYFFTQSTICVKQLAYAILELVIISV
FPELRDLVVDLHGKKHIKVA
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcgatggagacgatacaggatctgatcgaagatgccaaagtacggacggtctgg
tgggcgttggctacctttgtcgtaacttacttcttgactcatacaagtacatcgatgtgg
atgaatttacctatagcaattcttattgttgctggattacgaattttgagtaatgaggtt
gagttcaaatggaaggttaaatcagttggtgttctgagttatttgtctcacttggagaag
aaacagttgtccgtgaatgattcccgtctttccagctcatcacctccgctcaagtggaag
cggaaaattgattctcctatggtggaggctgctctcaatgagcttattgataaaatactc
agggattttgttgttgatttgtggtattcggagattactccagatagagaggcacctgag
ttgatgcgagatgtaattttggatgctattggtgaaatatcaggaagggcgaaagagata
aaccttgttgatttgctaactcgggatatagttgatttgatcggagatcacttggacctt
tttagaagaaaccaagctgcaataggtgttgatgttatggtaacattgtcatccgaagaa
agggatgaaagactgaaacaccatcttatggtttctgaagagcttcatcctgcactgatt
tcaccagagagtgagtacaaggttattcaacggcttattggtggagttttagcagtagta
ttaagaccacgagaagctcaatgtcctttggttcgaactattgctcgtgagattgttact
tgcttggttgtgcaacctcttttgaatttggcaaaccctgggtgtatcaatgaagtaatt
gaatatgttctacttgccattaatgatggtatgattaaggtggtggaaggttttgatcag
tcttcagttgaagtccgtggtgatgtctcttcctcaagcaaaattgcgtcctttaatagt
cagggaactgatttgacattggctagacttgatgatcagaaagaaacatattcagattct
aacagatgcgaggaagaatcagtgcagcctcgaccagctgactgggctcgaaaattagag
gcagcaacccagagaagaactgaagttcttgcccctgaaaatcttgaaaacatgtggaca
aaaggaagaaactacaaaaagaaggagaaaaaatatgtaaacacaagatttcaagaagct
attcctaggggttctgtgacaaagagtgctgtgttgacagggtatccaggaagtgaaatc
tctaccaataatgttggaacttctacgggaagtgaagagaaaactgtgatgcagacaatg
cccggtttaaatcttgatgctcaattatttgatggtaacacagcaggcacacagttggcc
tcagaattcaacaacttatcgtcatttggaggagatcatcatgttaacaattttaatgat
gctagtgagcaatctgctgatggaaataaaagtaggcttaagagatccagtagtagctcc
gatttgaatgttgaacctgatactaagaaggtatttacaggagatgttcgagagccgatt
atttcagagttctacagccctgattttggcaggcatactgaagaatataggggtaagatt
acctcaaatacagtacttcgcaatgaggagccacatgttccgaagcttaggtgccgggtt
attggagcatatgttgaaaaacttggatcaaaatcatttgcagtttattcaatcgctgtg
acagatgctgaaaacagaacttggtttgttaaaagaagatacaggaactttgaacggttg
catcgacatcttaaagaaattcctaattatacattacacttgcctcccaaaaggatattt
tcatcaagcaccgaggacacttttgttcaccagcgttgcattcagcttgacaagtatcta
gaagatctgttgtctatagctaatgtggctgaacaacatgaagtgtgggactttttaagt
gtttcctcaaagaattactcttttggaaaatcttcatcagtgatgagaacccttgcagtc
aatgtggacgatgctgctgatgatattgtacgccaatttagaggagtatcagatggcgta
atgtgcaaagctgttgattcgtcttctccccctagtgaagcctcttcttcagtcactggc
aggaccttgtcatggagtgctgatgagattgctaaagacatttcaaggcaaagtaacttg
gagacagtgcatagcgcttctgataacgaagaaggtgataaagatagtagccatggtcat
gaggatgatagatctggttcccaaggccatggttggcatccagactttgagttgaacaca
agtttgcctccaagggtgatagagcatggtggagagtctggtaatttagtctctgagaaa
cataatttaggtgttaaaactgaattgcttggtcagcaaggttctcctgcaataaaattc
cccacaacctcaagccatatggaggatccagttggaatgcccccggagtgggcacctcct
aacatgagcgttccgttgctgaatctagttgataatgtgtttcagcttaagaggagaggc
tggctaagaagacaggtcttctggatatctaagcaaatattacagctggtgatggaggat
gccatcgatgactggcttttgaggcagatttattggcttcggagggaggacactattgca
ctagggattcgatggattcaagatattctgtggccaggtggtacattctttacaaaagca
gggaatattcagggaaaattcgagaatactcggcctaaccagacaccttcgcagaacttc
agccaatttggtgggggtaatgtcaataaaccagggtcctttgaggaacaacttgaggca
gctcgtagagcaagcagcattaaaaagatgcttttcgatggcgctccgacagccttagtt
agcttaatcgggcacaagcaatacagacgatgtgcaagagatatatattttttcactcag
tcaactatatgcgtgaagcaacttgcttacgcgatattagaacttgtaatcatatcagtt
ttccctgagctgcgggatcttgtggtggatcttcatggaaagaaacatattaaagttgca
tag
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