Gossypium hirsutum (upland cotton): 107954326
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Entry
107954326 CDS
T04793
Name
(RefSeq) protein LATERAL ROOT PRIMORDIUM 1-like isoform X1
KO
K27807
short internodes/stylish family transcription factor
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ghi03000
]
107954326
Transcription factors [BR:
ghi03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
107954326
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GFIT
Motif
Pfam:
DUF702
Motif
Other DBs
NCBI-GeneID:
107954326
NCBI-ProteinID:
XP_016745348
UniProt:
A0A1U8P4V8
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Position
D07:complement(18561625..18566417)
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AA seq
357 aa
AA seq
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MGMVGLRDFVVVAPASFNHHHHHHHHHAQDPIIGNDQISGQNAATALGVGVGVFPLLTAS
PCLAPQNMEDSDLVNNSGRNKLSGMQLWQNQTSPNYLKKQSSILDNNNSSMNLIQTSGGG
GMGGGSGGSGTSSGTTCQDCGNQAKKDCSHRRCRTCCKSRGFDCPTHVRSTWVPAARRRE
RQLMTAAPTTACAGSSGSTSGAKKPRLVTSQTTTTPHTSTSNTTPRSLDTSSSHQDAGFK
ETLPGQVRAPAVFKCVRVTAVEDGEDEYAYQAVVKIGGHVFKGFLYDQGVEERDGFPNIS
ELHLGGGSGINGGSSSSPVLDPSQVYAATGGGLLGGSTYGRCFENLEDLVLPTFVNL
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggggatggttggtctccgcgatttcgttgttgttgctcctgcgtcttttaaccatcat
caccatcaccatcaccaccatgctcaagatcccatcatcggaaatgatcaaatcagcggt
caaaatgctgccacggcacttggtgttggcgttggtgttttcccactccttacagcatct
ccatgcttagctcctcaaaatatggaagattctgatttagtgaataacagtggtcgtaac
aaactcagtgggatgcagttatggcagaaccaaacctctcctaattatcttaaaaaacaa
tcttcaatccttgacaataacaattcttccatgaatttgatacaaaccagtggtggcggt
gggatgggaggtgggagtggtggctcaggtactagctcagggactacatgtcaagattgt
gggaaccaggccaagaaagattgtagtcataggagatgtagaacatgctgtaaaagtcgg
ggatttgattgccctactcacgtgaggagcacgtgggtgcctgctgctaggagaagagag
cgccagctgatgacggccgcccctactactgcctgtgctggctcgtcagggtctacttct
ggggctaagaagccgagacttgtgacttcacagactacaaccactcctcatacatcaact
tcaaacactactccaagaagcttagacactagctcaagtcaccaagatgcaggctttaaa
gagacattgccggggcaagtacgtgcaccggcggtattcaagtgtgtaagagtgacagca
gtagaggatggtgaagatgagtatgcatatcaagcagttgttaagattggtggacatgtg
ttcaaagggttcctttatgaccaaggagttgaagaaagagatgggtttccaaatatatct
gaattgcatcttggcggcggcagtgggataaatgggggttcatcatcctcacctgttctt
gatccttctcaggtttatgccgccactggaggtggcttgcttggtggttcaacttatggt
cggtgctttgagaatttagaagatttagtgcttcccacctttgtcaacctttaa
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