Gossypium hirsutum (upland cotton): 107954343
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Entry
107954343 CDS
T04793
Name
(RefSeq) vacuolar protein sorting-associated protein 26A isoform X1
KO
K18466
vacuolar protein sorting-associated protein 26A/B
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
107954343
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ghi04131
]
107954343
Membrane trafficking [BR:
ghi04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Retromer subcomplex
107954343
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps26
Arrestin_N
Motif
Other DBs
NCBI-GeneID:
107954343
NCBI-ProteinID:
XP_016745365
UniProt:
A0A1U8P2M9
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Position
D07:18133003..18138325
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AA seq
339 aa
AA seq
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MNYLVGAFKPPCNIFISFADGRSRKQVPLKKENGKTVMVALFQSQESIVGEVVIEPVHRK
KVEHNGVKIELLGQIELYFDRGNFYDFTSLVRELDIPGELYERKTYPFEFSTVEMPYESY
NGVNVRLRYILKVTISRNYVGNIVEYQEFVVRNYTPPPSINNIIKWLLLLLVLQYNYKYS
LFEHVSQAELGSFLYCPSQADDPMEVGIEDCLHIEFEYSKSKYHLKDVIIGKIYFLLVRI
KLKNMDLEIRRRESTGSGPNTYVETETLAKFELMDGAPVRGESIPIRLFLSPYELTPTYQ
NINNKFSVKYYLNLVLVDEEDRRYFKQQEITMYRLLETS
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgaattacctagttggagctttcaagccgccgtgtaatattttcatttcatttgcagat
ggaagaagccgtaagcaggttccactaaagaaggaaaatgggaaaacagttatggttgct
ctcttccagagccaagaaagtattgtaggagaggttgttatagaaccagtacataggaag
aaggtcgaacataatggagtaaaaattgagctccttggtcagatagaattatattttgat
agaggcaacttctatgattttacctcccttgtgcgcgaactagatattcctggtgaattg
tacgaaagaaaaacatatccatttgaattttctacggtggagatgccatatgagtcttat
aatggagtcaatgttaggcttaggtatatactgaaagtgacaatcagtagaaactatgtc
ggcaacattgtggagtaccaagaatttgtggttcgcaactatactccacctccatcaatc
aataacattatcaagtggcttttgcttctcttagtgctccaatacaattacaagtattct
ctttttgaacacgtgtctcaagcggaacttgggtcattcttatactgtccttctcaagca
gatgatccaatggaagtcgggattgaggattgtctacatattgaatttgagtacagtaaa
agcaagtatcatttgaaggatgtcattatcggcaaaatttattttcttcttgttagaatt
aagttaaaaaatatggaccttgagatcaggcgtcgagagtccactggatcagggcctaat
acatatgttgagacagagacccttgcaaaatttgagttgatggatggtgctcctgtaaga
ggcgaatccattcctatcagactctttttaagtccatatgaactgacaccgacatatcag
aacatcaacaataaattcagtgtgaaatactatttgaatcttgttctagtggacgaagaa
gatcgccggtacttcaaacagcaagaaatcactatgtaccggcttcttgaaacctcatag
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