Gossypium hirsutum (upland cotton): 107954375
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Entry
107954375 CDS
T04793
Name
(RefSeq) long chain acyl-CoA synthetase 1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00061
Fatty acid biosynthesis
ghi00071
Fatty acid degradation
ghi01100
Metabolic pathways
ghi01212
Fatty acid metabolism
ghi04146
Peroxisome
Module
ghi_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
107954375
00071 Fatty acid degradation
107954375
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
107954375
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
ghi01004
]
107954375
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ghi04147
]
107954375
Enzymes [BR:
ghi01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
107954375
Lipid biosynthesis proteins [BR:
ghi01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
107954375
Exosome [BR:
ghi04147
]
Exosomal proteins
Exosomal proteins of breast milk
107954375
Exosomal proteins of breast cancer cells
107954375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
107954375
NCBI-ProteinID:
XP_040952596
LinkDB
All DBs
Position
D07:complement(20824699..20830822)
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AA seq
662 aa
AA seq
DB search
MENRKVFSVKVEDGREGRDGKPSVGPVYRNLLAKQGYPPPDPEMSTTWTLFSSSVEKYPG
NRMLGWRKFVDGKVGPYIWKTYKEVYDEVLHVGSALRASGVEPGCRVGIYGANCPQWIMA
MEACGAHSLVCVPLYDTLGSGAVNFIIDHAEVDFVFVQDIKVKELLNPNCKSTQQLKAIV
CFTSLAEEDNAKASQMGIKTYSWTEFLHMGKENPWEISPPQPFSICTIMYTSGTSGDPKG
VVLTHETMATFVCGVDLFLDQFEDKMTVDDVYLSFLPLAHILDRMIEEYFFHRGASVGYY
HGNLKELRDDIMELKPTFLAGVPRVYDMIHEGIQQALQELSPLRKWIFDALYKHKLSWMN
KGYKQKFASPLADLLAFRKVKAKLGGRLRLLLSGGAPLSSEVEEFLRVTCCAFVVQGYGL
TETCGACTIGFPDEICFVGAVGSPAVYNDLRLEEVSDMGYDPLGNPPCGEICVKGKTLFS
EYYKNPELTRESFEDGWFHTGDIGQMLPNGIVKVIDRKKNLIKLSQGEYVALEYLENVYG
VTPIIDDVWVYGNSFKSMLVAVVVLHEEKAKKWAELNGYTVSLFELCSLSKLQNYVLSEL
KSTADKNKMRGFEYIKGVILEARAFDMERYLVTATLKKKRNNLLKYYQAEIDALYHNLTT
KK
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggaaaataggaaggttttttcagttaaggtggaggatggaagggaaggacgagatggg
aagccatcagttggtcccgtgtaccgtaacctactcgccaagcaaggataccctccacct
gatcctgagatgtctaccacatggactcttttcagttcatctgttgagaagtaccctgga
aacaggatgcttggatggcgaaaatttgttgatggcaaggtgggtccttatatctggaaa
acgtataaggaagtttatgatgaagttctgcatgttggttctgcattgcgagcatctggt
gttgaacctggatgtcgggttgggatttatggagcaaactgcccgcagtggattatggca
atggaggcctgcggtgcccacagtttggtttgtgtgcctctctatgatacactagggtct
ggagctgtaaattttatcatagaccatgcagaggttgattttgtattcgttcaagacata
aaagtaaaagaacttttgaatcctaattgtaaatcgactcaacagctgaaagcaattgtt
tgcttcacatcgctggctgaagaagacaatgctaaggcatctcaaatggggattaagaca
tactcgtggactgagtttctccacatgggaaaggaaaatccttgggagatttcaccacct
caaccatttagcatttgcaccattatgtatacaagtggaaccagcggagatcctaaaggc
gttgttttaacacatgaaacaatggcaacatttgtatgtggagttgatcttttcttggat
caatttgaggacaagatgacagtggacgatgtgtatttgtccttcctgccccttgctcat
atccttgaccgcatgatcgaagaatattttttccatagaggagcatctgttggctactac
catgggaacttgaaggaactgcgggatgacataatggagttgaaacccacatttttagca
ggtgtaccccgagtttatgatatgattcatgaaggtattcaacaagcactgcaagaacta
agtccattgaggaagtggatttttgatgctctctacaaacacaaactttcttggatgaat
aaagggtataagcaaaaatttgcatctcctttagcagatttgttggccttcaggaaggtc
aaagctaagttaggtggtcggcttcgattgttactatctggaggtgcaccattgagctct
gaagttgaagaattcctgcgggtcacttgttgtgcctttgttgtccaaggctatggattg
actgaaacatgtggagcttgcactattggttttccggatgagatatgctttgttggtgct
gtcgggtctccagctgtgtacaacgacttgcgcttagaggaggtttcagacatgggctat
gatccactcggaaatcctccctgtggtgagatatgcgtgaaaggaaagactcttttctct
gagtactacaaaaaccctgaactgacaagagaatctttcgaggatggatggtttcataca
ggagacataggccaaatgcttcctaatggaattgttaaggttattgataggaagaaaaat
cttattaagctctcccagggagagtatgtcgcactagagtacttggaaaatgtttacgga
gtcactccaatcatcgatgatgtatgggtctatggaaacagcttcaaatcaatgctagtt
gcagtggttgtgctacatgaagaaaaagctaaaaaatgggctgagttgaatggttacact
gtttcactctttgagctctgttctctgagtaagcttcagaattatgtcctctcagagctc
aaatccacagctgataaaaacaagatgagaggttttgagtatatcaaaggagtgattttg
gaagcccgggctttcgacatggagcgatatctagtgactgcaacattgaagaaaaaaaga
aacaatctgctcaaatattatcaggctgaaatagatgcactctaccataacttgactaca
aaaaagtga
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