Gossypium hirsutum (upland cotton): 107954388
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Entry
107954388 CDS
T04793
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
ghi
Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ghi03016
]
107954388
Enzymes [BR:
ghi01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
107954388
Transfer RNA biogenesis [BR:
ghi03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
107954388
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Gene cluster
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
Methyltransf_32
zf-U11-48K
Methyltransf_31
Methyltransf_25
Methyltransf_12
Methyltransf_11
Motif
Other DBs
NCBI-GeneID:
107954388
NCBI-ProteinID:
XP_016745419
UniProt:
A0A1U8P5C3
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Position
D07:21056955..21059648
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AA seq
458 aa
AA seq
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MKTKLMENRCKFWVPKKSRFCANSPLQNSLFCGNHTPRTNNQWIPCPIDPSHSVLQENLG
SHLRRCPLVKQVQSLSTQPFYQKGVNAGKEDEQEEPETGIPTSGFDIVTSEMKRNAVYSL
NISEFFEMIGKIESVHAQICNDIKDSYKIPEACGVWIKGEVDRNVPFQEKHVAQQASMLG
NLEEFGVLERIDGKENCELVERAENSNGVPAVVEFGAGRGYLTQMLADCYGIRRVFLVER
KAYKLKADRSLRQKESLILERLRIDIEDLNLNAVESLQRLPYIAIGKHLCGPATDLTLRC
CLANERSAEQCGVNCYLRGLAIATCCHHLCQWKHYINKKYLTSLGISKEEFHAITWFSSW
AVDADHGSDLSDVIDFKLRPESIEREECNGDANGVEAIAKNMKAIERAKLGFMCKQIIDM
GRLMWLKEHGLQTQLVKYVPSSISPENHLLIARHLGGR
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgaagactaagttgatggaaaatcgctgcaaattctgggttcccaaaaagagcagattc
tgtgcaaactcccctctccaaaattccttgttttgtggcaatcacactccgaggaccaat
aaccagtggatcccatgtccgattgacccttcccattctgtgcttcaggaaaacctggga
agccatctaaggagatgccccttagtcaaacaagttcaatccttgagcacccaacctttt
taccaaaagggtgttaatgctggcaaagaagatgaacaagaagaaccggaaactggaatt
cccacttctggttttgatattgtaacctctgaaatgaagagaaatgctgtttatagcttg
aacatatccgagttctttgagatgattggaaagattgagtcagtgcatgctcaaatttgt
aatgatattaaagactcctataagatacctgaagcttgtggcgtatggattaagggagaa
gtagacaggaatgtgccatttcaggagaagcatgttgcacaacaggcgtcaatgcttggg
aacttggaagagtttggggttttggaaaggattgatggcaaggaaaactgcgaacttgtg
gagcgagctgaaaatagcaacggtgttcctgcagtggttgaatttggagctgggagaggg
tacttgacacaaatgcttgcagattgctatggtattagaagggtatttctagttgagaga
aaggcctacaaacttaaggctgatcgatctttgcgacagaaagagagcttgatattagaa
cgtttgagaattgacattgaggatctgaacttgaatgctgttgagtcattgcaaagactt
ccttatatagctattggtaaacatctctgtggcccagcaacagatttgacacttagatgc
tgcctggcaaatgaaaggagtgctgaacaatgtggagttaattgttacttgagaggtctt
gcaatagcgacatgctgccatcacctttgccaatggaaacactacataaataaaaaatac
ttaactagtttgggtattagcaaagaagaattccatgcaattacgtggtttagcagttgg
gcagtcgatgctgatcatggttcagatctttctgacgttattgatttcaaattgcgtcca
gaatcaattgagagggaagaatgtaatggggatgcaaatggagtggaagccattgcaaag
aatatgaaagctattgagagggcaaagctaggcttcatgtgcaagcagataattgatatg
ggaaggctaatgtggctcaaggaacatggactccaaactcagcttgttaagtatgttcca
tcaagcatctctccagaaaaccatttattaatagccagacatctcggtggtcgctaa
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