KEGG   Gossypium hirsutum (upland cotton): 107954465
Entry
107954465         CDS       T04793                                 
Name
(RefSeq) protein RBL
  KO
K14961  COMPASS component SWD1
Organism
ghi  Gossypium hirsutum (upland cotton)
Brite
KEGG Orthology (KO) [BR:ghi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ghi03036]
    107954465
Chromosome and associated proteins [BR:ghi03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     107954465
    COMPASS/SET1 complex (yeast)
     107954465
    MLL-HCF complex
     107954465
    MLL3/MLL4 complex
     107954465
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st ANAPC4_WD40 Beta-prop_EML WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_IFT140_1st Beta-prop_WDR19_1st Beta-prop_TEP1_2nd EIF3I Beta-prop_HPS5 Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_VPS8 Beta-prop_SPT8 WD40_MABP1-WDR62_2nd WDR90_beta-prop_4th Beta-prop_WDR35_TULP_N Beta-prop_NWD2_C Beta-prop_SCAP Beta-prop_RIG_1st Beta-prop_IFT122_1st Beta-prop_NUP159_NUP214 NBCH_WD40
Other DBs
NCBI-GeneID: 107954465
NCBI-ProteinID: XP_016745523
UniProt: A0A1U8P5D7
LinkDB
Position
A13:complement(325958..330450)
AA seq 556 aa
MNAPIIDPLQGDFPEVIEEYLEHGLMKCIAFNRRGTLLAAGCSDGSCVIWDFETRGIAKE
LKDRDCSAAITSVCWSKYGHRILVSAADKSLTLWDVVSGQKVTRIVLQQTPLQARLHPGS
SMPSVCLACPLSSAPVIVDFSTGDTTALPVTVPDMGNVVAPPSRNKFPDGAPYTLTAACF
NKNGDLVYVGNSKGEILIIDHKNVKVLAMVPISSGAVVKNIVFSRNGQHLLTNSSDRIIR
IYENILPLKDGLGALHDLNKTIKEEDTLENLKAVGSKCLVLFREFQDSITKTHWKAPCFS
GDGEWVISASASKGEHKFYIWDRAGHLVKILEGPKEQLIDLAWHPVHPIIVSVSLTGLVY
IWAKDYTENWSAFAPDFKELEENEEYVEREDEFDLVPETEKVKESDINEDDEVDIVTVEK
DPFSDSDMSQDELCFFPATPCPDDPQQQDKCVGSSSKLIDSNHSGSPLSEENGQNGQNGQ
AVHNASSPLEEDTAGGNQLKRKRKLSEKGLELQAEKVRKPMKPLKSTGRSSKTKNKSVVD
QDSGNGLYADDGSDDY
NT seq 1671 nt   +upstreamnt  +downstreamnt
atgaatgccccgattattgatccattgcaaggggattttccagaggttatagaagagtat
ttggagcatgggcttatgaaatgcattgcctttaatcgccgtggtacccttctcgccgct
ggatgctctgatggaagttgtgtaatttgggattttgagaccaggggcattgcaaaggag
cttaaggatagagactgttccgctgctataacaagtgtctgctggtcaaagtatggtcat
aggattctagtgtctgccgctgacaagtcattaacactttgggatgtagttagtggtcag
aaggttacgcgtatcgttctgcaacaaacgcctctacaagctcgtttacatcctggttct
tcaatgccatctgtctgcttagcttgccccctgtcatctgctccagtgattgttgacttc
agtactggagatacaactgcactcccagtcaccgttcctgatatgggaaatgttgttgct
cctccttcacgcaacaagttccctgatggagctccttacacattgacggccgcatgcttt
aacaagaatggagatctggtatatgtggggaactcgaaaggtgaaatacttataattgat
cacaaaaacgttaaagtgcttgctatggttccaatttctagtggcgctgttgtcaagaac
attgttttcagcagaaatgggcagcatctccttactaattcaagtgatcgaattatcagg
atttatgaaaatattctgcctttgaaagatgggcttggagctcttcatgaccttaacaag
accatcaaagaggaagatactcttgagaatctgaaggcagttggatccaaatgcttagtt
ctttttcgagagtttcaggattcaatcacaaagacacattggaaagcaccttgttttagt
ggtgacggtgagtgggtaatatctgcttctgctagcaaaggagagcataagttctacata
tgggacagggctggtcatcttgtaaaaatccttgaaggtccaaaggaacaactgattgat
ttagcatggcatcctgtccaccctattattgtctctgtttccttgactggcttggtttat
atttgggctaaagactacactgaaaactggagtgcatttgctcctgatttcaaagagctt
gaagaaaatgaggagtatgtagaacgagaagatgaatttgatctggtgcctgaaactgaa
aaggtgaaagaatctgatataaatgaagatgatgaagttgatattgtgacagtggagaag
gatccgttcagtgattctgatatgtcacaggatgagttatgtttctttcctgcaactcct
tgtcctgatgatccccaacagcaggacaagtgtgtgggaagttcatcaaagttgattgat
agcaatcactccggatcccctctctcagaagagaatggacagaatgggcaaaatggacaa
gcagtccacaatgcttcaagtccactcgaagaggacacggctggaggcaatcagttgaaa
agaaaacggaagctttcagagaaggggttggagttacaggcagagaaggtcaggaagccc
atgaaacccttgaaatctactggtaggtcatcgaaaacaaaaaataaatccgttgttgat
caggattctggaaatggcttatatgctgacgatggctctgatgattactag

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