Gossypium hirsutum (upland cotton): 107954481
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Entry
107954481 CDS
T04793
Name
(RefSeq) auxin response factor 18
KO
K14486
auxin response factor
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
107954481
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Gene cluster
GFIT
Motif
Pfam:
Auxin_resp
B3
AUX_IAA
Motif
Other DBs
NCBI-GeneID:
107954481
NCBI-ProteinID:
XP_040952667
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Position
D07:complement(22844671..22849200)
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AA seq
693 aa
AA seq
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MANVQVNPRGSSIAHSESGSSDDDLYAELWKLCAGPLVEIPRNHERVFYFPQGHMEQLEA
STNQELNNQAPLFNLPSKILCRVIHVQLLAEQETDDVYAQITLQPEADQSEPTSPDPCPA
EAPKRTVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMNQATPTQELAAKDLHGYEW
RFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGDNGELRVGARRLARQQTTMPS
SVISSQSMHLGVLATAAHAVTTQTLFVVYYKPRTSQFIIGVNKYLEAIKNGFSVGMRFKM
RFEGEDTPDRRFTGTIVGVGDFSPHWSESKWRTLKIQWDEPATIQRPERVSPWEIEPFAP
SASINLVQPAVKNKRPRPVDIPVSEITTNSVGSTFWGRGSTQSHELTQVGSTPEIQSSES
QVMWGMRQKEADYCRDYNSNAWPHSPLVNVSLNLFPNSVSDKNRTEKPQITLTGYALPSL
SRPSKGLMHDQVEKGKKSETSTGCRLFGFNLTDTISAVIPTDKEQTNTTVDHNGVWGSLA
AASHIDQNPETAKQKHVAAEASSKEMQAKQGASTTSTRSRTKVQMQGIAVGRAVDLTVLK
GYDDLINEVEKMFDIKGELRPSGKWSVVFTDDEGDMMLVGDDPWMDFCKMVRKIFIYSSE
EVKKISPRCKFAVSSLEGEGTAVTIDSEHKSET
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggctaatgtacaagttaatccaaggggttcttctattgctcactcggagtcaggttcg
agtgatgatgatctatacgcagagctatggaagttatgcgcaggcccgttggtggagatt
cctcggaatcacgagagagtgttttacttccctcagggtcacatggaacaattagaagca
tccactaatcaggaacttaataatcaagccccactgtttaatcttccttctaagatccta
tgtcgtgttattcatgtccagttactggcagaacaagagactgatgacgtttatgctcag
atcactttgcagcctgaagcagatcaaagtgaacctacaagtcctgatccttgcccagct
gaggctccaaagaggacagttcattcgttttgtaagattttaacagcatcggatacgagc
actcatggagggttctccgttcttcgaaagcatgctactgagtgcctgcctcctttggat
atgaatcaggcaacccctacacaggagttggctgctaaagatcttcatggatatgaatgg
cggttcaagcatatatttagaggacaaccacggagacatttgcttacaacagggtggagc
acctttgtcacttccaagagattggttgcgggagatgcatttgtgtttctcagaggtgat
aatggagaacttagagttggggctcgacggcttgctcgccaacagaccaccatgccttca
tctgtgatttccagccagagcatgcatttaggagtgcttgctactgctgctcatgctgtt
acaacgcagaccctctttgttgtgtactacaagccaaggacgagccaattcataataggt
gttaataagtatttggaggccattaaaaatggattctcggttggtatgcgttttaagatg
agatttgagggagaagacactcctgatagaaggttcacgggtaccatagttggggtagga
gatttttccccacattggtcggaatctaaatggcgaaccttgaagattcaatgggatgaa
cctgcaacaatacaaaggccagagagagtttcaccatgggaaatagagccatttgcgcct
tctgcttccataaatcttgtacaaccagctgtaaagaacaaaaggccacggcctgttgat
attccagtttctgaaattactacaaattcagttggttcaaccttctggggtcgtggttca
acccaatctcatgaactaactcaagtaggaagcacacctgaaatccaaagcagtgaaagc
caagttatgtggggtatgaggcagaaagaagctgattactgtcgagattataattcgaac
gcctggccacattctcctcttgtgaatgtctctttaaacctttttcctaattcagtgagt
gacaaaaacagaactgaaaaaccacaaatcactctcactggttatgccttgccttctcta
tcgaggccaagtaagggcctgatgcatgaccaagttgagaaagggaaaaaatctgagact
tctacaggttgccggttgtttgggtttaatttgacagacaccattagtgcagttatcccc
actgacaaggaacaaacgaacacaacggttgatcacaatggtgtttgggggtctcttgca
gctgcgtctcatattgatcagaatccagaaacagctaaacagaagcatgttgcagcagag
gcctcgtccaaggagatgcaggctaagcagggtgcatccaccacttcaaccagaagtcgt
actaaggtacaaatgcaagggattgcggttggtcgtgctgtggacttaactgtgttgaaa
ggatatgatgatctcattaatgaagtggagaaaatgtttgatatcaagggagagcttcgc
cccagtggtaaatggtccgttgttttcactgatgatgagggtgatatgatgcttgttggc
gatgatccatggatggatttttgcaagatggtgagaaagatcttcatatattcaagcgaa
gaggtgaagaagattagtccaagatgcaaatttgcagtgtcgtctttggagggtgaaggg
actgctgtaaccattgattcagagcataaatctgaaacatga
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