Gossypium hirsutum (upland cotton): 107954620
Help
Entry
107954620 CDS
T04793
Name
(RefSeq) dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 2
KO
K12667
dolichyl-diphosphooligosaccharide---protein glycosyltransferase subunit 2 (ribophorin II)
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi00510
N-Glycan biosynthesis
ghi00513
Various types of N-glycan biosynthesis
ghi01100
Metabolic pathways
ghi04141
Protein processing in endoplasmic reticulum
Module
ghi_M00072
N-glycosylation by oligosaccharyltransferase
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
107954620
00513 Various types of N-glycan biosynthesis
107954620
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107954620
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribophorin_II
Ribophorin_II_3rd
Ribophorin_II_C
Ribophorin_II_2nd
Motif
Other DBs
NCBI-GeneID:
107954620
NCBI-ProteinID:
XP_016745719
UniProt:
A0A1U8P663
LinkDB
All DBs
Position
D07:complement(27988603..27995613)
Genome browser
AA seq
692 aa
AA seq
DB search
MARRLAGFLVLLLVVSICEAAFLFQPISDSHRSAALELFTPDHGSFKSLEETYEALRTFQ
ILGIEKKPDLTATACRSISETVGSSSSTAKDLFYALKANSIAECKIDKKASKGIISRLNA
AVSGASSLLDFYYSVGGLVLIKDQSSEADVHLADAEGVFRSVKAFSQSDGRWRYSSNNPE
SSAFAAGIALETLAGIVSLASSEIDQSLISTLKNDIIKLFDSIEKYDDGALYFDDKLVDG
HEYQGPLSTTSSVLRGLTAFAAVTAENLNLPGDKMLGLAKFFLGICVPGDAKDFFNQIDS
LACLESNRVSIPLILSFPSTVLSLTRKDSLKVGVSTVLGSEVPSLTVKLVGAFSSGSKDA
SLVESQELDFDKASGLHILNGLPKSIDVGSYTFVFEVVLHEPEHEEVYFMGSQTKVPISV
TGLIKVENSEIAVLDSDLGSIESQKKLDLAGKNAISLSANHLQKLRLSFQLTTPHGRSFK
PHQAFLKLRHESKVEHIFVVGNSGKQFEIVLNFLGLVEKFFYLSGKYDMELTIGDAAMEN
SLLVAIGHIELDLPEAPEKAPRPPPQPVDPYSRYGPKAEITHIFRAPEKRPPQGLSLAFL
GLTILPLLGFLIGLLRLGVNLKNFPTKPVPATFAVLFHVGIGAVLLLYVFFWVKLDLFQT
LKLLGFLGVFLVFVGHRILSHLAAASAKLKSA
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggccagacgtctagctggatttctggttctcttacttgtagtatcgatctgcgaagcc
gcttttctttttcaacccatctccgattctcatcgatctgccgctcttgaactcttcact
cccgaccatggatcattcaaaagcttggaagaaacatatgaggcactaagaacatttcag
attcttggaattgaaaagaagcctgatttaacagctacagcttgccgctcaatttctgaa
actgttgggtcatcttcatcaactgcaaaggatcttttctatgctttaaaagcaaatagt
atagcggaatgcaagattgacaagaaagcttctaagggcattatttcaagacttaatgct
gccgtaagtggtgcgagttcattgcttgacttctactattcagtaggaggtttggtactt
atcaaggatcaaagttctgaagctgatgttcatcttgctgatgctgagggagtgttccgc
tctgtcaaggctttcagccagagtgatggcaggtggcgttatagttcaaataatcccgaa
tctagtgcttttgctgctggaattgcacttgaaacgcttgctggaattgtttcgttagca
tcttcagaaattgaccaatctttgattagtactctaaagaatgatataatcaagcttttt
gacagcatcgagaaatatgatgatggggccctttactttgatgataaacttgttgatggt
catgaataccaaggtcctttatcaaccacctcatctgttcttagaggcctaacagcattt
gctgcagtgactgctgaaaatctcaatcttccaggggacaaaatgcttggattagctaaa
ttcttccttggtatttgtgttcctggtgatgccaaagatttcttcaaccaaatagactcc
ttagcttgtttggaaagcaacagggtttctatcccactaatcttatcatttccatcaacg
gtgctttcattgactagaaaagactcactcaaggttggggttagcactgtgcttggttca
gaagtaccatctctaacagtaaagcttgtgggagcttttagttctggttcaaaggatgct
tctctagttgaaagccaggaacttgattttgacaaggcatctgggctacatatcttgaac
ggcttgccgaagagtattgatgttggaagttacacatttgtttttgaggttgtgcttcat
gaacctgagcatgaagaggtttattttatgggaagccaaacaaaagtaccaatatctgtc
actggacttatcaaggttgaaaattcagaaattgcagttcttgacagtgatcttgggagt
atagaatcgcagaaaaagctagatttagctggaaaaaatgctatatcattatcagcaaac
cacctccagaagctgcgtctatcctttcagttaacaactcctcatggacgttcttttaag
ccacatcaggcatttctcaagttgagacatgagagcaaggttgagcacatctttgtggtt
gggaactctggaaaacagtttgagatagttctaaattttcttgggctggttgagaagttc
ttctatctctcaggcaaatatgacatggagctcactattggtgatgctgctatggagaac
tctttgttagtggctatcggacatattgagttagatctaccagaagcacccgagaaggca
ccccgccctcctcctcagcccgtagatccatactcaagatatggacccaaagcagagata
acacacatcttcagggctcctgaaaagcgtccacctcaggggctttcccttgctttcctg
gggcttactatcttgccattgcttggatttttgattgggctattacgtctaggggtgaac
ctgaagaactttcccaccaaacccgtacctgccacatttgccgttctcttccatgttggc
attggagcagttctattgctctatgtgtttttctgggtgaagttggatctattccaaaca
ctgaagctacttggtttcttgggagtattccttgtgtttgttgggcatagaatcctatcc
cacctggccgctgcgtcagccaagttgaaatctgcctga
DBGET
integrated database retrieval system
