Gossypium hirsutum (upland cotton): 107954625
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Entry
107954625 CDS
T04793
Name
(RefSeq) serine/threonine protein phosphatase 2A regulatory subunit B''alpha-like isoform X1
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
ghi
Gossypium hirsutum (upland cotton)
Pathway
ghi03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ghi00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107954625
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ghi01009
]
107954625
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ghi03019
]
107954625
03036 Chromosome and associated proteins [BR:
ghi03036
]
107954625
Protein phosphatases and associated proteins [BR:
ghi01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
107954625
Messenger RNA biogenesis [BR:
ghi03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
107954625
Chromosome and associated proteins [BR:
ghi03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
107954625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_5
P2R3B_EF-hand
DUF4187
Motif
Other DBs
NCBI-GeneID:
107954625
NCBI-ProteinID:
XP_016745723
UniProt:
A0A1U8P669
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All DBs
Position
D07:28119427..28126012
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AA seq
574 aa
AA seq
DB search
MALSIKMDIDAVEDVTCLDPELLQLPDVSPFALKASPQLVEDLFSQWLSLPGTGHLVKSL
IDDAKSGTIVNASTNFSTLNAVGSHSLPSMFPSSNAPPLSPRSSSGSPRTSRQKSSPSAL
GSPLKLVSEPMQEIIPQFYFQNGCPPTKELKEQCLSQINRLFNNPLNGLQIDEFKAVTKE
VCKLPSFLSSALFRKIDVDWTGIVTRDAFVKYWVDGNMLTMDIATQIFEILKRPGCKYLT
QVDFKPVLRELLATHPGLEFLRNTPEFQDRYAETVIYRIFYHINRSGNGRLTLRELKRGS
LVAAMQHADEEEDINKILRYFSYEHFYVIYCKFWELDTDHDFFIDRENLIRYGNHALTYR
IVDRIFSQAPRKFTSEVEGKMGYEDFVYFMLSEEDKSSQPSLEYWFKCIDLDGNGVLTPN
EMQFFYEEQLHRMECMAQEPVLFEDILCQIIDMIAPEVKATFFLITVISFYLLVSYYFDL
THDNLQREYCITLQDLKRCKLSGNVFNILFNLNKFVAFESRDPFLIRQEREEPTLTEWDR
FAHREYIRLSMEEDVEDASNGSAEVWDESLEAPF
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atggcattatctataaagatggatattgatgcagtggaggatgttacttgtttggaccct
gagcttttgcagcttcctgatgtttctccatttgcactaaaagccagtcctcaacttgtc
gaggacttgttctctcagtggctttcgcttcctgggaccggccatctggtgaaatctttg
attgatgatgcaaagtcagggacaatagttaacgcttctacaaacttttctactctaaat
gctgttgggagccattcgttgccttccatgtttccaagtagcaatgcacctccactttct
ccaagaagctcatctggttctcctcgcacgtcaaggcagaagtccagcccttctgctctt
ggctctccattgaaattagttagtgaaccaatgcaagaaatcattccacagttttatttc
caaaatggttgtccaccaaccaaggaattgaaagaacaatgtctttctcaaattaatcgc
ctttttaataatcctctaaatggattgcaaatagatgagtttaaagcagtgacaaaggaa
gtttgcaagctaccatctttcctctcttctgcactttttagaaaaatagatgtagactgg
accggaatagtgaccagagatgctttcgttaagtattgggttgatggaaatatgctgacg
atggatatagcaactcaaatatttgaaattcttaagcgtccaggctgcaagtacctcact
caggttgacttcaaacctgttcttcgagaacttttggcaacccatccaggattagaattc
ctgcgaaacacgcctgaatttcaagatagatacgctgaaactgtcatatacagaatattt
tatcacatcaatagatcgggaaatggccgtcttaccctcagggagctcaaaagaggaagt
ctggttgctgccatgcaacatgcagatgaggaagaggacattaacaaaatccttaggtac
ttctcatatgaacatttctatgttatatactgtaagttttgggagttggacacggaccat
gatttcttcatcgacagagaaaatctcattagatatggcaatcatgcccttacctacagg
attgttgatagaatattttcacaggctccacgaaaatttactagtgaggtggaagggaag
atgggttatgaggactttgtctacttcatgctttcggaggaggacaaatcatctcagcct
agtcttgagtattggtttaagtgcatagatttggatggaaatggtgtgctgacgccaaat
gaaatgcaatttttctatgaggagcagctgcatcgaatggaatgcatggcccaagaacct
gtgctctttgaggacatattgtgtcaaataattgacatgattgctcctgaggttaaagct
actttctttctaataaccgtgatttcattctacttgcttgtttcatactattttgattta
actcacgataatttgcagagagaatattgcatcacgctacaggatttgaaaagatgcaaa
ctttcaggaaatgtttttaacatccttttcaatcttaataagtttgtggctttcgaaagc
cgtgatccattcctcatacggcaggaacgcgaggaaccaactttgacagagtgggatcgc
tttgcacatagagagtatatcaggctttcaatggaagaagatgttgaagatgcttcgaat
gggagtgctgaagtatgggatgagtcgcttgaagctccattttaa
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